PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY36375.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 305aa MW: 35222.9 Da PI: 8.2968

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY36375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	1e-15	97	144	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++++ +G g+W++I + g++R++k+c++rw++yl GAY36375.1 97 KGLWTQEEDRILLEYIRVHGRGRWNRIHKVTGLKRCGKSCRLRWLNYL 144 678*******************************************97 PP
2	Myb_DNA-binding	57	4.6e-18	151	195	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g +T+eE+ l+++++ +lG++ W++Ia +++ gRt++q+k++w+++l GAY36375.1 151 GEFTEEEENLIIRLHDLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 195 78*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MAQMPLSLCM WYKFTSGMVG ALSETFSNLN AIYRMLTASQ GYDYSTFKLH VCIAVAAHFS 60 VENAIQSAYF QSRNTHTNSL SLSLSKQNMK AENEYKKGLW TQEEDRILLE YIRVHGRGRW 120 NRIHKVTGLK RCGKSCRLRW LNYLSPNVKH GEFTEEEENL IIRLHDLLGN RWSLIAGRVP 180 GRTDNQVKNH WNTHLCKKLG INKKQKKKFV SSSKTQAQTQ SSRIIKDDNG LTHDNLNFEH 240 LQDSEMALDQ EPGDRKKSNE EAESINHHCN ESLLLPTEDD FLNLCSPILL EFLEGQPLDL 300 MWHNN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	197	208	KKLGINKKQKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	3e-60	MYB family protein