PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY33942.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB
Protein Properties Length: 126aa    MW: 15098 Da    PI: 10.0072
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY33942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding316e-101455148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd++l  ++ ++G  +W+     ++  +++k+c++rw +yl
       GAY33942.1 14 RGAWSKEEDDKLRAYILRYGHWNWTQ----LP--KSGKSCRLRWMNYL 55
                     89******************777777....99..89**********97 PP

2Myb_DNA-binding51.62.2e-1662106248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g+ T+eE++ +++  +q+G++ W++Ia++++ gRt++++k++w+++l
       GAY33942.1  62 GNYTKEEEDTIIKTRQQHGNK-WALIAAKLP-GRTDNEIKNYWHTHL 106
                      789******************.*********.************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MVRAPTYDEK GMKRGAWSKE EDDKLRAYIL RYGHWNWTQL PKSGKSCRLR WMNYLRPDIK  60
HGNYTKEEED TIIKTRQQHG NKWALIAAKL PGRTDNEIKN YWHTHLKKKI DKKTDSADQE  120
HEETSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-51MYB family protein