![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GAY33942.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 126aa MW: 15098 Da PI: 10.0072 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31 | 6e-10 | 14 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l ++ ++G +W+ ++ +++k+c++rw +yl GAY33942.1 14 RGAWSKEEDDKLRAYILRYGHWNWTQ----LP--KSGKSCRLRWMNYL 55 89******************777777....99..89**********97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.2e-16 | 62 | 106 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+ T+eE++ +++ +q+G++ W++Ia++++ gRt++++k++w+++l GAY33942.1 62 GNYTKEEEDTIIKTRQQHGNK-WALIAAKLP-GRTDNEIKNYWHTHL 106 789******************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 126 aa Download sequence |
MVRAPTYDEK GMKRGAWSKE EDDKLRAYIL RYGHWNWTQL PKSGKSCRLR WMNYLRPDIK 60 HGNYTKEEED TIIKTRQQHG NKWALIAAKL PGRTDNEIKN YWHTHLKKKI DKKTDSADQE 120 HEETSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23250.1 | 2e-51 | MYB family protein |