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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr20032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB | ||||||||
Protein Properties | Length: 216aa MW: 24361.2 Da PI: 8.3251 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ +k +G g+W++ ++ g+ R++k+c++rw +yl Dr20032.1 14 KGAWTKEEDEKLISHIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.7 | 4.6e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ eEdel+++++ +lG++ W+ Ia++++ gRt++++k++w+++ Dr20032.1 67 RGNFSGEEDELIIKLHSLLGNK-WSIIASRLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MGRTPCCEKA HTNKGAWTKE EDEKLISHIK VHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF SGEEDELIIK LHSLLGNKWS IIASRLPGRT DNEIKNYWNT HIKRKLLSRG 120 LDPKTHRPLT XITTFRAEYP KEANDDSSDE GNSSTLSTED DNSSLINLEL SISLPEISPT 180 MPMNSSVEKT SALNALCLCY NLGFQRSQAC ACQYXL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 1e-86 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr20032.1 |