PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr20032.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB
Protein Properties Length: 216aa    MW: 24361.2 Da    PI: 8.3251
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr20032.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.71e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+l+  +k +G g+W++ ++  g+ R++k+c++rw +yl
        Dr20032.1 14 KGAWTKEEDEKLISHIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP

2Myb_DNA-binding53.74.6e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++ eEdel+++++ +lG++ W+ Ia++++ gRt++++k++w+++
        Dr20032.1  67 RGNFSGEEDELIIKLHSLLGNK-WSIIASRLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MGRTPCCEKA HTNKGAWTKE EDEKLISHIK VHGEGCWRSL PKAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF SGEEDELIIK LHSLLGNKWS IIASRLPGRT DNEIKNYWNT HIKRKLLSRG  120
LDPKTHRPLT XITTFRAEYP KEANDDSSDE GNSSTLSTED DNSSLINLEL SISLPEISPT  180
MPMNSSVEKT SALNALCLCY NLGFQRSQAC ACQYXL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.11e-86MYB family protein