PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr15348.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB
Protein Properties Length: 252aa    MW: 28243 Da    PI: 8.0772
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr15348.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.54.9e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l++++++ G+g +W + +++ g++R++k+c++rw++yl
        Dr15348.1 14 KGPWSPEEDSKLKEYIEKNGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62
                     79*********************************************97 PP

2Myb_DNA-binding41.43.4e-1369111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++eEd ++  +++  G++ W+ Ia+ ++ gRt++++k++w++
        Dr15348.1  69 GEFSPEEDNIIFTLFATIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                      78*******************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KNGTGGNWIA LPHKAGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSPEEDNIIF TLFATIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGI  120
TPPTHPRNNQ VFFPPSLQPN LMITSTPPPP LLHPPNYNNH PLVFGCDLYD HHHQQPSCSY  180
VKQELGVEFI NGGGGDHQII NNVNNNMSFG GDEGSLMEVN EGVFWDHDGE NGGVLSGNKC  240
STGLNLKNMY YF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.15e-78MYB family protein