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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr15348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB | ||||||||
Protein Properties | Length: 252aa MW: 28243 Da PI: 8.0772 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.5 | 4.9e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++++ G+g +W + +++ g++R++k+c++rw++yl Dr15348.1 14 KGPWSPEEDSKLKEYIEKNGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 41.4 | 3.4e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ Dr15348.1 69 GEFSPEEDNIIFTLFATIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KNGTGGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSPEEDNIIF TLFATIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGI 120 TPPTHPRNNQ VFFPPSLQPN LMITSTPPPP LLHPPNYNNH PLVFGCDLYD HHHQQPSCSY 180 VKQELGVEFI NGGGGDHQII NNVNNNMSFG GDEGSLMEVN EGVFWDHDGE NGGVLSGNKC 240 STGLNLKNMY YF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36890.1 | 5e-78 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr15348.1 |