![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dr15045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 308aa MW: 34531.8 Da PI: 6.7174 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.4e-15 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l +++k g+W+ ++ g++R++k+c++rw +yl Dr15045.1 34 KGPWTPEEDKKLMEYIKNNXHGSWRNLPKNAGLNRCGKSCRLRWTNYL 81 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.2 | 1.6e-17 | 87 | 130 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE+ l+++++ lG++ W++Ia+ ++ gRt++++k++w++ Dr15045.1 87 RGKFTEEEERLIIHLHSILGNK-WSSIASQLP-GRTDNEIKNYWNT 130 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 308 aa Download sequence |
ILSQSPIFSN HPIFSSESID MGRSPCCDAI GLKKGPWTPE EDKKLMEYIK NNXHGSWRNL 60 PKNAGLNRCG KSCRLRWTNY LRPDIKRGKF TEEEERLIIH LHSILGNKWS SIASQLPGRT 120 DNEIKNYWNT NIKKKLMVMG IDPVTHRRRT DLELLSGLNF SNLNTVMNPL DINALRVLQA 180 DAAHLAKLQL VQSLMMSLLG TSAMPSLYNI NPSSSGINVN NLQGHDQNDS LFINSFVTPT 240 TTVNSTPSLV TATSPEITIN GDQVQEPITN SIDHMSTNSS ASTPFESWDG LNYLNDLDTD 300 FSWKDILE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G16770.2 | 1e-78 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | Dr15045.1 |