PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

Dr15045.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB

Protein Properties

Length: 308aa MW: 34531.8 Da PI: 6.7174

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15045.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.4e-15	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l +++k g+W+ ++ g++R++k+c++rw +yl Dr15045.1 34 KGPWTPEEDKKLMEYIKNNXHGSWRNLPKNAGLNRCGKSCRLRWTNYL 81 79********************************************97 PP
2	Myb_DNA-binding	55.2	1.6e-17	87	130	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE+ l+++++ lG++ W++Ia+ ++ gRt++++k++w++ Dr15045.1 87 RGKFTEEEERLIIHLHSILGNK-WSSIASQLP-GRTDNEIKNYWNT 130 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
ILSQSPIFSN HPIFSSESID MGRSPCCDAI GLKKGPWTPE EDKKLMEYIK NNXHGSWRNL 60 PKNAGLNRCG KSCRLRWTNY LRPDIKRGKF TEEEERLIIH LHSILGNKWS SIASQLPGRT 120 DNEIKNYWNT NIKKKLMVMG IDPVTHRRRT DLELLSGLNF SNLNTVMNPL DINALRVLQA 180 DAAHLAKLQL VQSLMMSLLG TSAMPSLYNI NPSSSGINVN NLQGHDQNDS LFINSFVTPT 240 TTVNSTPSLV TATSPEITIN GDQVQEPITN SIDHMSTNSS ASTPFESWDG LNYLNDLDTD 300 FSWKDILE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	1e-78	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr15045.1