PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

Dr10986.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

MYB

Protein Properties

Length: 236aa MW: 27590.3 Da PI: 6.52

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr10986.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54	3.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd +l+ +++ +G g+W++ +++ g+ R++k+c++rw +yl Dr10986.1 14 KGPWTTEEDHILISYIQSFGHGNWRALPKKAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53.3	6.4e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e ++++++ lG++ W++Ia++++ gRt++++k+ w++yl Dr10986.1 67 RGNFSQEEEETIIKLHEALGNR-WSAIAAKLP-GRTDNEIKNIWHTYL 112 89******************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MVRAPCCEKM GLKKGPWTTE EDHILISYIQ SFGHGNWRAL PKKAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF SQEEEETIIK LHEALGNRWS AIAAKLPGRT DNEIKNIWHT YLKKRVNPNE 120 MVKPPKRKTR AKFIKKETSI TSVLSPSSSV ITEDNNSENI IKDQDQWINI SSFNHDQVIP 180 EIDESFWSEM VMPMQMDNNN NNDHQSLRSF SVEDEEMDFW LRVFLEAEEL QELPEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	3e-74	MYB family protein

Link Out ? help Back to Top
Ensembl	Dr10986.1