PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr08855.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB
Protein Properties Length: 298aa    MW: 33561.9 Da    PI: 6.3443
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr08855.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.52.7e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ ++++G g+W   ++  g++R++k+c++rw +yl
        Dr08855.1 14 KGPWTPEEDKILIEHIQKHGQGSWIQLPKLAGLNRSGKSCRLRWINYL 61
                     79********************************************97 PP

2Myb_DNA-binding50.74.1e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rgr+  eE+ l+++++  lG++ W+t a++++ gRt++++k++w+++l
        Dr08855.1  67 RGRFDDEEQRLIIHLHSILGNK-WSTMAAHLP-GRTDNEIKNYWNTHL 112
                      89********************.*********.************996 PP

Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MRRPPCCEEI GIKKGPWTPE EDKILIEHIQ KHGQGSWIQL PKLAGLNRSG KSCRLRWINY  60
LRPDIKRGRF DDEEQRLIIH LHSILGNKWS TMAAHLPGRT DNEIKNYWNT HLKKKLLQMG  120
IDPVTHQPRT DLNLFSSLRN LVLASTNSND SLTCSTDINA LRLQADAANL AKLQLLQILM  180
QFLACRYPTM ESSSALIGTH QVNDQFDQGL VHGSMGVSQD ALSVPAVISN PDSPGSNNGL  240
FGNYSANPAP SVVPVSPENQ KDIQDHMNWT EDCNSSRDWD ELNLENLDNE LGWKDILE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.21e-81MYB family protein