![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dr08855.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 298aa MW: 33561.9 Da PI: 6.3443 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.5 | 2.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ ++++G g+W ++ g++R++k+c++rw +yl Dr08855.1 14 KGPWTPEEDKILIEHIQKHGQGSWIQLPKLAGLNRSGKSCRLRWINYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.7 | 4.1e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr+ eE+ l+++++ lG++ W+t a++++ gRt++++k++w+++l Dr08855.1 67 RGRFDDEEQRLIIHLHSILGNK-WSTMAAHLP-GRTDNEIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 298 aa Download sequence |
MRRPPCCEEI GIKKGPWTPE EDKILIEHIQ KHGQGSWIQL PKLAGLNRSG KSCRLRWINY 60 LRPDIKRGRF DDEEQRLIIH LHSILGNKWS TMAAHLPGRT DNEIKNYWNT HLKKKLLQMG 120 IDPVTHQPRT DLNLFSSLRN LVLASTNSND SLTCSTDINA LRLQADAANL AKLQLLQILM 180 QFLACRYPTM ESSSALIGTH QVNDQFDQGL VHGSMGVSQD ALSVPAVISN PDSPGSNNGL 240 FGNYSANPAP SVVPVSPENQ KDIQDHMNWT EDCNSSRDWD ELNLENLDNE LGWKDILE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G16770.2 | 1e-81 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | Dr08855.1 |