PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr06223.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 314aa    MW: 34349.4 Da    PI: 6.1693
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr06223.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.51e-31134192259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+edp v++itY+geHnh+
  Dr06223.1 134 SDMWAWRKYGQKPIKGSPYPRGYYRCSSSkGCQARKQVERSREDPGVLIITYTGEHNHP 192
                79*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MEESDNDWDL FAVVRSCRRT QPPAPTRDAF SFFCSPFPPE VPSVFPSPVK EEVVLGCGTC  60
FPDLAGGSSR DGALLEELCK PFFPKPXLQH HPIPXPSPSP AQIRPRMAQI PRSKRRKNQQ  120
KRVVCHVPAD GLASDMWAWR KYGQKPIKGS PYPRGYYRCS SSKGCQARKQ VERSREDPGV  180
LIITYTGEHN HPVPTHRNSL AGSTRSKLSP AAGAGAGGDA APVSPPTSVV GHSPTTPITS  240
SMEEETELLV EDMEVMGDDD LVFMGLNEVV DGGDMAAEDD EVSRFFQDQS FPPPLPWLDA  300
GIGWLAKGYA LVLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-52WRKY family protein