PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr05929.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB
Protein Properties Length: 330aa    MW: 36941.4 Da    PI: 7.7907
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr05929.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.54.7e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l+ +++q G+g +W + ++++g++R++k+c++rw++yl
        Dr05929.1 14 KGPWSPEEDAKLKSYIEQNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62
                     79*********************************************97 PP

2Myb_DNA-binding37.65e-1269111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++eEd ++  +    G++ W+ Ia+ ++ gRt++++k++w++
        Dr05929.1  69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                      569******************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDAKLKSYIE QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKDNQQARR ALKQEAKRVE DGGLGVVSDA FRSVYWPDQQ QMTMFDGVNN PPDLHHNNNN  180
DNNNNNIDDH ASIRKLLIKL GGRFSSDEGT SRASSSVSVM PTQQIYGGDT MNLMQPSFHE  240
GVNSQLMQNP STGFPTELDE MFQCNTVKLE GLDYFYGTAN MIDGNNGSIS SASTSMNWTE  300
VSPLIYPTLS ATYQGMQQCL LEEPVHHGTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.17e-84MYB family protein