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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr05809.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB | ||||||||
Protein Properties | Length: 278aa MW: 31102.6 Da PI: 6.507 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++ +G+g+W++++ g+ R+ k+c++rw +yl Dr05809.1 14 KGPWTPEEDIILVSYIQDHGPGNWRSVPINTGLMRCSKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.8 | 1.4e-14 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++++ +lG++ W++Ia++++ Rt++++k++w+++l Dr05809.1 67 RGNFTPHEEGMIIHLQSLLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ DHGPGNWRSV PINTGLMRCS KSCRLRWTNY 60 LRPGIKRGNF TPHEEGMIIH LQSLLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKYH 120 QTTENFGNCX DLMTTSNSSI FPTYSQTSST YASSTENISR LLEGWMRTSS SSSSPKHIAA 180 ATMDQNNMIN SGSYVPASHG VFESMLSFDN LSSIAWEKSS AESAIFNGDS EGKERVESHN 240 NPPLSMLEKW LLDEATGQAE EDLMELSGGD QCSDSVIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08810.1 | 2e-97 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr05809.1 |