PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr04273.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 317aa    MW: 35386.5 Da    PI: 5.9396
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr04273.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.81.1e-28121179259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D ++WrKYGqK++kgs++pr+YYrC+s  gC+++k+vers+ dp+++++tY++ Hnh+
  Dr04273.1 121 TDTWAWRKYGQKPIKGSPYPRNYYRCSSWkGCTARKQVERSRVDPTMLVVTYSSGHNHS 179
                69*************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MCMGVSAKMH CWANLLWQQA YNNEYFREKS MHERMFMQCM FARPAQPAAR GDITHIXLKP  60
KLHERVYAFA LLINKGTEGD HESLELENQG LQENTIWMSA RREVKKRVVT VPVAGEAAPS  120
TDTWAWRKYG QKPIKGSPYP RNYYRCSSWK GCTARKQVER SRVDPTMLVV TYSSGHNHSW  180
PLSSDRNYRA EPPLKLKVSV SASDSDPAPA DADADSEPKK VDPKGGWSVD LIGGDQGEFR  240
WFSDVGSPST SASPTEGSDD TLLYGSIAGC GVAMLWTEEM ERDGEEDEDS LFAGLGELPE  300
CSAVFRPRIM AAAETKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-43WRKY family protein