![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Dr02898.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 238aa MW: 28181.1 Da PI: 7.2142 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.1 | 9.9e-19 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ll+d v+++G g+W+++++ g++R++k+c++rw +yl Dr02898.1 16 KGPWTPQEDKLLIDHVNLHGEGRWNSVSKLTGLRRSGKSCRLRWVNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.7e-17 | 69 | 113 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ Dr02898.1 69 RGKITPQEENIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 113 8999******************.*********.************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence |
MNVQFGWGTF EDGWRKGPWT PQEDKLLIDH VNLHGEGRWN SVSKLTGLRR SGKSCRLRWV 60 NYLRPDLKRG KITPQEENII LELHARWGNR WSTIARSLPG RTDNEIKNYW RTHFKKGKTS 120 KNVERARARF LKQQQEQQQQ QQQQQEFVLQ VQVDQEQQQQ VQQQVLHQYN CYDQQTNEVQ 180 HVGEQDIDEM IMAYMYPNMS SSMTSMSDGS SEDIGSSLGN XWNLDDVVQQ HDQVLYFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G24310.1 | 5e-67 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | Dr02898.1 |