PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr02898.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB
Protein Properties Length: 238aa    MW: 28181.1 Da    PI: 7.2142
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr02898.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.19.9e-191663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed+ll+d v+++G g+W+++++  g++R++k+c++rw +yl
        Dr02898.1 16 KGPWTPQEDKLLIDHVNLHGEGRWNSVSKLTGLRRSGKSCRLRWVNYL 63
                     79********************************************97 PP

2Myb_DNA-binding54.52.7e-1769113147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ T++E+ +++++++++G++ W+tIar ++ gRt++++k++w+++
        Dr02898.1  69 RGKITPQEENIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 113
                      8999******************.*********.************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MNVQFGWGTF EDGWRKGPWT PQEDKLLIDH VNLHGEGRWN SVSKLTGLRR SGKSCRLRWV  60
NYLRPDLKRG KITPQEENII LELHARWGNR WSTIARSLPG RTDNEIKNYW RTHFKKGKTS  120
KNVERARARF LKQQQEQQQQ QQQQQEFVLQ VQVDQEQQQQ VQQQVLHQYN CYDQQTNEVQ  180
HVGEQDIDEM IMAYMYPNMS SSMTSMSDGS SEDIGSSLGN XWNLDDVVQQ HDQVLYFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.15e-67MYB family protein