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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr01659.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | MYB | ||||||||
Protein Properties | Length: 209aa MW: 23659.1 Da PI: 8.6287 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.4e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+ +k +G g+W++ ++ g++R++k+c++rw +yl Dr01659.1 14 KGAWTKEEDERLIAHIKVHGEGCWRSLPKAAGLRRCGKSCRLRWINYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 59.4 | 8.1e-19 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ lG++ W++Ia++++ gRt++++k++w+++ Dr01659.1 67 RGNFTQEEDELIIKLHGHLGNK-WSLIAAKLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDERLIAHIK VHGEGCWRSL PKAAGLRRCG KSCRLRWINY 60 LRPDLKRGNF TQEEDELIIK LHGHLGNKWS LIAAKLPGRT DNEIKNYWNT HIKRKLLSRG 120 IDPATHRPVM ESAEKKDEKV ANGEVGQEAS SWQCPDLNLE LCISLPSQEP VKMEKTTLCF 180 SCGSSECKCD TNFLGLSSGV LDYRNAHMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16720.1 | 3e-90 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr01659.1 |