PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr01659.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family MYB
Protein Properties Length: 209aa    MW: 23659.1 Da    PI: 8.6287
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr01659.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.4e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+l+  +k +G g+W++ ++  g++R++k+c++rw +yl
        Dr01659.1 14 KGAWTKEEDERLIAHIKVHGEGCWRSLPKAAGLRRCGKSCRLRWINYL 61
                     79********************************************97 PP

2Myb_DNA-binding59.48.1e-1967111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T+eEdel+++++  lG++ W++Ia++++ gRt++++k++w+++
        Dr01659.1  67 RGNFTQEEDELIIKLHGHLGNK-WSLIAAKLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MGRSPCCEKA HTNKGAWTKE EDERLIAHIK VHGEGCWRSL PKAAGLRRCG KSCRLRWINY  60
LRPDLKRGNF TQEEDELIIK LHGHLGNKWS LIAAKLPGRT DNEIKNYWNT HIKRKLLSRG  120
IDPATHRPVM ESAEKKDEKV ANGEVGQEAS SWQCPDLNLE LCISLPSQEP VKMEKTTLCF  180
SCGSSECKCD TNFLGLSSGV LDYRNAHMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16720.13e-90MYB family protein