PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015882.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WOX
Protein Properties Length: 248aa    MW: 28112.5 Da    PI: 9.2833
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015882.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.75.6e-202482457
                           -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
               Homeobox  4 RttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                           R+++tkeq++ Le+l+++  r+p+ae+++ ++++l    +++ ++V++WFqN++a++++
  Cse_sc015882.1_g030.1 24 RWNPTKEQINMLENLYAQgLRTPTAEQIQGITTRLqtygHIEGKNVFYWFQNHKARQRQ 82
                           9****************99**************************************97 PP
2Wus_type_Homeobox112.72e-362283364
      Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                             RW+Pt+eQi++Le+ly +GlrtP++e+iq it++L++yG+ie+kNVfyWFQN+kaR+rqk
  Cse_sc015882.1_g030.1 22 ACRWNPTKEQINMLENLYAQGLRTPTAEQIQGITTRLQTYGHIEGKNVFYWFQNHKARQRQK 83
                           57***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MNHGSISPEL PPMVVGAGTP AACRWNPTKE QINMLENLYA QGLRTPTAEQ IQGITTRLQT  60
YGHIEGKNVF YWFQNHKARQ RQKEKQDHMS LFRQYNHHNR HLHPQFVHLS PPPNVVYEPY  120
YMPQSNLAFY PQHTQVLSPT TNASTIIKRR STRATKPRFV DNTGFTPAYQ PESVGGNNMM  180
HKEQGGTIFN NKNYGHKETL DLFPLHPTGI LQERSVDTTS NGSCLSSGAC TSNSSGYAVD  240
RLSFDFFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.13e-42WOX family protein