PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014530.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WOX
Protein Properties Length: 298aa    MW: 32871.9 Da    PI: 6.0287
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014530.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox49.57.4e-163191257
                           T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
               Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                           r+R+t+++eq+ +Le+ F++   +p +ee  ++ k l    ++ +++V++WFqNrR + ++
  Cse_sc014530.1_g020.1 31 RSRWTPKPEQILILESIFNSgMVNPPKEETVKIRKLLekfgSVGDANVFYWFQNRRSRSRR 91
                           89*****************99*************************************997 PP
2Wus_type_Homeobox106.41.8e-343093265
      Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                           +r+RWtP+peQi iLe++++sG+++P+kee+ +i++ Le++G ++d+NVfyWFQNr++R+r++q
  Cse_sc014530.1_g020.1 30 VRSRWTPKPEQILILESIFNSGMVNPPKEETVKIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 93
                           589***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MEDQAQTQTQ IQTQTPGSPR SQCLERNEPV RSRWTPKPEQ ILILESIFNS GMVNPPKEET  60
VKIRKLLEKF GSVGDANVFY WFQNRRSRSR RRQRQIQASL ISAGSIDQQH QQQPMNARCA  120
NSSIGGVIEY QDSAYPTATQ GFVIQQPAGI LPMLQSLSPL AGSSSCSSRL NGVDEIYTIS  180
SQASYFPEID QNTSLPSTFL HIDTSKVHYE FGRVTDSFFV ASGIITVFIN GVPTEVESGP  240
VNIKAMFGEE LILVHSSGVL VSLDEYGVSL PGLQHGESYF LVSKLQQSAS QSTSSLCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17810.11e-51WOX family protein