PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009411.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WOX

Protein Properties

Length: 396aa MW: 43796.5 Da PI: 8.0506

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009411.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.2	2.4e-17	55	115	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ Cse_sc009411.1_g030.1 55 KPRWNPKPEQIRILESIFNSgMVNPPRDEIRRIRARLqeygQVGDANVFYWFQNRKSRSKN 115 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.8	3.7e-36	54	116	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei+ri+a+L+eyG+++d+NVfyWFQNrk+R+++k Cse_sc009411.1_g030.1 54 PKPRWNPKPEQIRILESIFNSGMVNPPRDEIRRIRARLQEYGQVGDANVFYWFQNRKSRSKNK 116 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MGSSNRHWPS MFKSKPNFQD HQWQQSHGSN HHLSSATNRP SPYTSGCDER TPEPKPRWNP 60 KPEQIRILES IFNSGMVNPP RDEIRRIRAR LQEYGQVGDA NVFYWFQNRK SRSKNKNRQL 120 PRSQNHQTQY GVAATKAATT TASSSSSSDK SSSKSIEFLL NSPTVSVNQQ PQTYLGGGGT 180 SSRSHQQHHG EFFQEPFYFP VVQQAPTTST FTQGFCFSDL GAMINQENHH ANDNQRVVCS 240 SEMLLTDLMM NHQYGIPSKN AKNKDVDEGN IMKMLSHTTT PSLATTSLTQ PPPACPTSFV 300 PPAPTIVLSA NNDIQGVGEA GTGKSIVFIN DVPFELGAGP FNVKEAFGSD AVLFDSTGQN 360 VVTNEWGVTT QSLQNGAFYY LVRSFGYDHA GTIDLI

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MGSSNRHWPS MFKSKPNFQD HQWQQSHGSN HHLSSATNRP SPYTSGCDER TPEPKPRWNP  60
KPEQIRILES IFNSGMVNPP RDEIRRIRAR LQEYGQVGDA NVFYWFQNRK SRSKNKNRQL  120
PRSQNHQTQY GVAATKAATT TASSSSSSDK SSSKSIEFLL NSPTVSVNQQ PQTYLGGGGT  180
SSRSHQQHHG EFFQEPFYFP VVQQAPTTST FTQGFCFSDL GAMINQENHH ANDNQRVVCS  240
SEMLLTDLMM NHQYGIPSKN AKNKDVDEGN IMKMLSHTTT PSLATTSLTQ PPPACPTSFV  300
PPAPTIVLSA NNDIQGVGEA GTGKSIVFIN DVPFELGAGP FNVKEAFGSD AVLFDSTGQN  360
VVTNEWGVTT QSLQNGAFYY LVRSFGYDHA GTIDLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-58	WOX family protein