PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006672.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WOX
Protein Properties Length: 302aa    MW: 34281.9 Da    PI: 8.4438
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006672.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.53.1e-203293257
                           T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
               Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                           ++R+t+t++q+++L+el++    r p+ae+++++A++l    +++ ++V++WFqN++a+e++
  Cse_sc006672.1_g020.1 32 STRWTPTSDQIRILKELYYTsgIRSPTAEQIQRIAAQLrqygKIEGKNVFYWFQNHKARERQ 93
                           58*****************7679*************************************97 PP
2Wus_type_Homeobox114.55.1e-373195265
      Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                           ++tRWtPt++Qi+iL+ely+ sG+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
  Cse_sc006672.1_g020.1 31 SSTRWTPTSDQIRILKELYYtSGIRSPTAEQIQRIAAQLRQYGKIEGKNVFYWFQNHKARERQKK 95
                           789***************998******************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MKNTMETQHH QQDIHDHLGN KNSSNYVCRQ SSTRWTPTSD QIRILKELYY TSGIRSPTAE  60
QIQRIAAQLR QYGKIEGKNV FYWFQNHKAR ERQKKRFTPT VPPPQPPSSH YSTDHINHHI  120
PTAAMHIQSH NYHHELPSSH VYGHPHKLYT THHIGVGSSS SSQGMMTVGC GYGSVAMEKS  180
FRECSISPPG ENRATGGIGQ NFGSRSRVGV GSFSFFDKIK PKRYEIVENH NEDEDQEGKN  240
SPEIETLPLF PIHGGSHQDF FGMKTDLSSE HSVGGYYTGG NWYRPDGRAS LELTLNTYGY  300
YD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-40WOX family protein