PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc005551.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WOX
Protein Properties Length: 286aa    MW: 32372.8 Da    PI: 7.2784
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc005551.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.27.8e-202989357
                           --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
               Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                           +R+t+t++q+++L+el++    r p+a++++++A++l    +++ ++V++WFqN++a+e++
  Cse_sc005551.1_g010.1 29 SRWTPTSDQIRILKELYYTngIRSPTADQIQKIAARLrhygKIEGKNVFYWFQNHKARERQ 89
                           8*****************7457*************************************97 PP
2Wus_type_Homeobox112.52.1e-362791265
      Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                           +++RWtPt++Qi+iL+ely+ +G+r+P++++iq+i+a+L++yGkie+kNVfyWFQN+kaRerqk+
  Cse_sc005551.1_g010.1 27 SSSRWTPTSDQIRILKELYYtNGIRSPTADQIQKIAARLRHYGKIEGKNVFYWFQNHKARERQKK 91
                           789***************9989*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MEGEQDVANR NNNISGSATS NYLCRQSSSR WTPTSDQIRI LKELYYTNGI RSPTADQIQK  60
IAARLRHYGK IEGKNVFYWF QNHKARERQK KKFTSTAPPQ PPPPSTTVFS DHHHHMHVQS  120
HHLPYLYNQH MQQHKLYTTH HIPSMEGGST SSQAFIPVGC GYGPIAIEKS FRECSISPEK  180
PRVASGSVQN LGSWVGVDFD SKMKMEYYET QAQDSDEENL STDIETLPLF PIHGGSTTSS  240
GIHHDFFSMK ESSEYSNGGC YTGGNWFRSD SLTSLELSLN SYGYYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.15e-41WOX family protein