PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc004117.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WOX

Protein Properties

Length: 178aa MW: 20355.7 Da PI: 8.7946

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc004117.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.6	6.9e-21	24	85	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+ps++++++++++l +++ ++V++WFqN++a+e++ Cse_sc004117.1_g050.1 24 KCGRWNPTNEQVKVLTDLFRSgLRTPSTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 85 568***************99************************************97 PP
2	Wus_type_Homeobox	113.9	8.3e-37	24	87	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ Cse_sc004117.1_g050.1 24 KCGRWNPTNEQVKVLTDLFRSGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 87 578***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MDEGMSGFGL KPSRGGSGGG GGAKCGRWNP TNEQVKVLTD LFRSGLRTPS TDQIQKISSQ 60 LSFYGKIESK NVFYWFQNHK ARERQKRRRV YVESDQNDHN IAKQHFAEVE SGRVIETLQL 120 FPVHSLSFAD HSEKARGYTN DECKENTSPY ATMYTCGTEM ENHYQHRHPS LDLRLSFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	90	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	1e-54	WOX family protein