PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62024713-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB | ||||||||
Protein Properties | Length: 296aa MW: 33234.3 Da PI: 6.6689 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.7 | 6.5e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+llv++++++G +W++ +++ g+ R++k+c++rw +yl AUR62024713-RA 14 KGPWTPEEDQLLVNYIHLHGHSNWRALPKHAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.9 | 4.2e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l AUR62024713-RA 67 RGNFTQEEEDTIINLHQMLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MGRAPCCEKM GLKKGPWTPE EDQLLVNYIH LHGHSNWRAL PKHAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TQEEEDTIIN LHQMLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRLPKPE 120 IDSATAMTTT VDTTSGPTKK RARRLKSSSK DGISEDPPRK HVNVRPTSSN IRDPISPQPC 180 TSEVSTITTS TSSTSENDNC SKENVVKKEG YIGEFPEFND DFWMEVLSVE DTAMSTEDLP 240 SVSQCYLNNS SATEPAAACL TDSKAVAAHS DDMDFFWYNL LTRPDDHLPE FSEML* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 6e-80 | MYB family protein |