PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62020759-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 1587aa MW: 173027 Da PI: 6.4764

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62020759-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.1	9.5e-09	794	835	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++ d + +G++ +++I++ + ++t +c+++++k AUR62020759-RA 794 PWTFEEKEIFMDKLATHGKD-FRKISSFLD-HKTTADCIEFYYK 835 8***************99.*****.*********98 PP
2	Myb_DNA-binding	22.5	2.7e-07	1007	1047	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT +E l+v+a+ +G++ + I+r++ +++ qck ++ AUR62020759-RA 1007 DWTDDEKTLFVQAFLSHGKD-FLMISRRVR-TKSSDQCKVFFS 1047 6***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1587 aa Download sequence
MPPEPLPWDR KELFRDRKHN HDFGGGGGPP SSSRWRDSSS SSSYGGSRNN NNSDFSPRWG 60 FPSSDFRRPP GHGKQGGWHM YPEDHGYPTP RSADRFMDDN NMFRPSGMRG DGRYGRFYRE 120 NRPSFGQRDW RGQSWEGNHH HGGPANGVGR PHIVNDQRVV NDSPVRASHP HSDPRDQIHA 180 KEQVDKTSDA NGSNTGQRVD KENLLGSLDW KPLKWSRSGS LTSRGSGFSH SSSSKSIGGE 240 SSDVKCDLPP KNVTPVQSPS GDAVACAPSV TPSEETSSRK KPRLGWGEGL AKYEKKKVDG 300 PEDNVKSNAI SASNVEPSHS LPSNLVVKSP KISGFSDCSS PATPSSFACS SSPGLEDRTY 360 GKAVDAGGDA SNFSVSSMPV HESQLEGSHF RLEKLELKSV ANLGSLLNEL LQADDQCSMD 420 SGFMRSSAFN KLLLWKGDIS KTLELTETEI DSLENELTSL KSETDRIFHR PASSNSGPAD 480 YKDGPNDCQT VFPRPHPLEV VSNEEIVSED RLPCDDAGDV QAENKDEDID SPGTATSKFV 540 EPPVQKPISH DVCKNSSGES WLVESTKSAM DVGTSCQGHD RSVVQVNNII AIDIENPGVC 600 DKKVDSICDT VIASNKELAN RAAEGLLKLL PSCDSMVANR ASCTPADSTM KEKFLRKKRS 660 LRFKERVISL KYRAFHHLWK EDLRLLSLRS HRAKPQKKPD PSSRILQVGS HKNRSSIRSR 720 FTSPAGSLSL VPTTEIINFT GKLLSDSQAK VYRSGLKMPA MILDEKEKMS RFLSNNGLVE 780 DPCAVEKERT LINPWTFEEK EIFMDKLATH GKDFRKISSF LDHKTTADCI EFYYKNHKSE 840 CFEKIKKLEV KKIGKPISAN TYLVTSGKKW SREMNAASLD ILGAASVIAA QADQALETSK 900 LLLGKSSNKR SRGSDGIIEE SSSLFGAEDE RETAAADVLA GICGSLSSEA MSSCITSSVD 960 PGEGNQDRKH QKVGSSIRRP LTPEVTQNVD DDDTCSDESC GEMDPVDWTD DEKTLFVQAF 1020 LSHGKDFLMI SRRVRTKSSD QCKVFFSKAR KCLGLDILPS GSGGHHASND TNGGGSDTED 1080 AGIVETGSIV CSDKSGSRID EDLLQVNQDV SKPDATVELN ALEENCGPGQ LDHKDSDLVL 1140 KDLIQQGHLA DVSDPLACRG MVDVMVKDSA TAVDTKRSEF HLMIQDDKTK VNTLICRSAT 1200 DVARHDSSVA MDMEAASGIS DSISEVHVSS APVEFVNPRD GLFKSSSVGN VHHLLSGSSM 1260 MNQSELCRDL KGFPLDLSVK SELHDVRTIG DESIDQSYQR SFLRKCSRAV SHNSVAELPL 1320 LQQSEDELGS CCSSKTEKSC RNGNVKLFGK ILSKTSSVDK PCSNVVLHDE KAKHHSNQDV 1380 NGNSTSFADD HNSFLGLENV PIRSYGFWDG TKIQTGFPTL PDSALLLAKY PGAFSNYSIS 1440 SPKSEQQPLP AAVNGNECNM NGACVFSPRE FSSSNGGNVI DYTILRNQDG LQPFRLDMKK 1500 RPQDVVFPEV QRNGFESLKQ QGKGVVKLNV VQGGDILGGS CSGISDPVAA LKLHYASQQY 1560 GGVGGHSVNG IVREEPWRSQ GGDVGR*

Sequence ? help Back to Top

Protein Sequence Length: 1587 aa Download sequence

MPPEPLPWDR KELFRDRKHN HDFGGGGGPP SSSRWRDSSS SSSYGGSRNN NNSDFSPRWG  60
FPSSDFRRPP GHGKQGGWHM YPEDHGYPTP RSADRFMDDN NMFRPSGMRG DGRYGRFYRE  120
NRPSFGQRDW RGQSWEGNHH HGGPANGVGR PHIVNDQRVV NDSPVRASHP HSDPRDQIHA  180
KEQVDKTSDA NGSNTGQRVD KENLLGSLDW KPLKWSRSGS LTSRGSGFSH SSSSKSIGGE  240
SSDVKCDLPP KNVTPVQSPS GDAVACAPSV TPSEETSSRK KPRLGWGEGL AKYEKKKVDG  300
PEDNVKSNAI SASNVEPSHS LPSNLVVKSP KISGFSDCSS PATPSSFACS SSPGLEDRTY  360
GKAVDAGGDA SNFSVSSMPV HESQLEGSHF RLEKLELKSV ANLGSLLNEL LQADDQCSMD  420
SGFMRSSAFN KLLLWKGDIS KTLELTETEI DSLENELTSL KSETDRIFHR PASSNSGPAD  480
YKDGPNDCQT VFPRPHPLEV VSNEEIVSED RLPCDDAGDV QAENKDEDID SPGTATSKFV  540
EPPVQKPISH DVCKNSSGES WLVESTKSAM DVGTSCQGHD RSVVQVNNII AIDIENPGVC  600
DKKVDSICDT VIASNKELAN RAAEGLLKLL PSCDSMVANR ASCTPADSTM KEKFLRKKRS  660
LRFKERVISL KYRAFHHLWK EDLRLLSLRS HRAKPQKKPD PSSRILQVGS HKNRSSIRSR  720
FTSPAGSLSL VPTTEIINFT GKLLSDSQAK VYRSGLKMPA MILDEKEKMS RFLSNNGLVE  780
DPCAVEKERT LINPWTFEEK EIFMDKLATH GKDFRKISSF LDHKTTADCI EFYYKNHKSE  840
CFEKIKKLEV KKIGKPISAN TYLVTSGKKW SREMNAASLD ILGAASVIAA QADQALETSK  900
LLLGKSSNKR SRGSDGIIEE SSSLFGAEDE RETAAADVLA GICGSLSSEA MSSCITSSVD  960
PGEGNQDRKH QKVGSSIRRP LTPEVTQNVD DDDTCSDESC GEMDPVDWTD DEKTLFVQAF  1020
LSHGKDFLMI SRRVRTKSSD QCKVFFSKAR KCLGLDILPS GSGGHHASND TNGGGSDTED  1080
AGIVETGSIV CSDKSGSRID EDLLQVNQDV SKPDATVELN ALEENCGPGQ LDHKDSDLVL  1140
KDLIQQGHLA DVSDPLACRG MVDVMVKDSA TAVDTKRSEF HLMIQDDKTK VNTLICRSAT  1200
DVARHDSSVA MDMEAASGIS DSISEVHVSS APVEFVNPRD GLFKSSSVGN VHHLLSGSSM  1260
MNQSELCRDL KGFPLDLSVK SELHDVRTIG DESIDQSYQR SFLRKCSRAV SHNSVAELPL  1320
LQQSEDELGS CCSSKTEKSC RNGNVKLFGK ILSKTSSVDK PCSNVVLHDE KAKHHSNQDV  1380
NGNSTSFADD HNSFLGLENV PIRSYGFWDG TKIQTGFPTL PDSALLLAKY PGAFSNYSIS  1440
SPKSEQQPLP AAVNGNECNM NGACVFSPRE FSSSNGGNVI DYTILRNQDG LQPFRLDMKK  1500
RPQDVVFPEV QRNGFESLKQ QGKGVVKLNV VQGGDILGGS CSGISDPVAA LKLHYASQQY  1560
GGVGGHSVNG IVREEPWRSQ GGDVGR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-169	MYB family protein