PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62014537-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB | ||||||||
Protein Properties | Length: 200aa MW: 22828.4 Da PI: 4.2825 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.5 | 3.6e-09 | 8 | 55 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 WT e d+ + a +++ + W++Ia+ ++ ++t +++k +++ + AUR62014537-RA 8 WTWEQDKAFETALAMHFEDyseaKWAKIASQIPGNKTIEDVKQHYHVL 55 *****************99**************************976 PP | |||||||
2 | Myb_DNA-binding | 30.6 | 8e-10 | 98 | 135 | 2 | 39 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 ++W++ E+ +++ + ++G+g+Wk+I++++ k+R++ q AUR62014537-RA 98 QPWSEAEHRQFLLGLDRYGKGDWKSISKEFVKTRSATQ 135 79********************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MENSSSLWTW EQDKAFETAL AMHFEDYSEA KWAKIASQIP GNKTIEDVKQ HYHVLFEDIM 60 AIESGMVPIP SYTPSGRAHN FEVPVTEEEY TWESRKGQPW SEAEHRQFLL GLDRYGKGDW 120 KSISKEFVKT RSATQGNEMN SAINQAMFQE GFVEVQPMQQ QVPVVVPQEY MSPPESWCLE 180 DELAADFNVN ECSSQLPPL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 1e-35 | MYB family protein |