PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001688-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 309aa    MW: 34542.4 Da    PI: 7.315
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001688-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81.1e-072266345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+ E +++ +a + + ++   +W ++a++++ g+t  +++  + 
   AUR62001688-RA 22 SWTQAENKIFENALAVYDKDtpdRWQKVAAMLP-GKTVGDVIKQYK 66
                     7********************************.****99988775 PP
2Myb_DNA-binding48.22.6e-15133177347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   AUR62001688-RA 133 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 177
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEVLSSYLSS ASWLIDESRS TSWTQAENKI FENALAVYDK DTPDRWQKVA AMLPGKTVGD  60
VIKQYKELED DVSNIEAGLV PIPGYDIDAA SAFTLEWVNH NGYDAYKHTY SPGGKRGPPG  120
ARPPDQERKK GVPWTEEEHK LFLMGLKKYG KGDWRNISRN FVVTRTPTQV ASHAQKYFIR  180
QLSGGKDKRR ASIHDITTVN LENEALSPDN NSKRSNSPEQ STITVQTQQQ ANSITMPKTH  240
FQWDQSNNGT AIAFDSMQGN MFMAPYGVGS YGLKVQGQNL QRGDYLENYV GAQSMGFQIQ  300
PTQHYPHG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.12e-98MYB family protein