PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc05828.1.g00010.1.sm.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 333aa    MW: 36179.4 Da    PI: 10.0815
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc05828.1.g00010.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.46e-322376255
                       G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                                  prlrWtp+LH++Fv+a+++LGG++kAtPk++l+lm+v gLt++hvkSHLQ+YR 
  Zpz_sc05828.1.g00010.1.sm.mk 23 PRLRWTPDLHHCFVHAIHKLGGQDKATPKRVLQLMGVGGLTISHVKSHLQMYRN 76
                                  8****************************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.0E-311979IPR009057Homeodomain-like
PROSITE profilePS5129412.6531979IPR017930Myb domain
SuperFamilySSF466895.38E-162178IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-242376IPR006447Myb domain, plants
PfamPF002496.1E-102475IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MARTVVGRER NGGVRQYNRS KVPRLRWTPD LHHCFVHAIH KLGGQDKATP KRVLQLMGVG  60
GLTISHVKSH LQMYRNMRND LGMQGMMMMQ GHRVDQEHVH GGCMELRTDT LLRRDHERGA  120
PPPCRGRHAP KPGKEPMLCS QLKRKTDTPS CEAEEAGRST SPEYVLRGQG ICERDRSWSL  180
YRALAAAAAA AACGYNSMRT QMQMQAAAMV VALPSPPHAE VEPRGIKRQQ LAFLVAPPAG  240
CCRRDHPFEM PGTAPAHRVA GTTNGLLPAG TPRKARGSPP VDDDGCALSL SLALVDTTGS  300
SSSGQCRTNS FEGSMRSSTT CSSGSRVSLD LSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-172478357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-172478357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-172478357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-172478357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc05828.1.g00010.1.sm.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0689109e-93BT068910.1 Zea mays full-length cDNA clone ZM_BFc0191L18 mRNA, complete cds.
GenBankHQ8587029e-93HQ858702.1 Zea mays clone UT1158 G2-like transcription factor mRNA, partial cds.
GenBankKJ7268139e-93KJ726813.1 Zea mays clone pUT3230 G2-like transcription factor (GLK48) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012698081.11e-89uncharacterized protein LOC101766248
TrEMBLK4AB703e-88K4AB70_SETIT; Uncharacterized protein
STRINGSi036127m5e-89(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76102950
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.19e-28G2-like family protein