PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04426.1.g00010.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 385aa    MW: 43042.5 Da    PI: 4.864
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04426.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.61.3e-45611862128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratks 80 
                                   ppGfrF+Ptdeelv ++Lk+++++ + +    i++vd+yk++P++Lp+  ++++++++w+fFs+ d+ky++g+r++r+t +
  Zpz_sc04426.1.g00010.1.am.mk  61 PPGFRFSPTDEELVLYFLKRRIASGRPTP--YIADVDVYKFHPSHLPErsALQTGDRQWFFFSRLDRKYPNGSRASRTTGD 139
                                   8*********************9999555..6**************94357888999************************ PP

                           NAM  81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   gyWkatg+d+ v+s +g+ vg kktLv+++grap+ge+tdWvm ey++
  Zpz_sc04426.1.g00010.1.am.mk 140 GYWKATGRDRFVCS-GGRSVGNKKTLVYHHGRAPRGERTDWVMYEYTI 186
                                   *************9.99*****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-5355209IPR003441NAC domain
PROSITE profilePS5100550.90660209IPR003441NAC domain
PfamPF023654.0E-2361186IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MGMQAGPNSS CHLMRLHGAE RARVQLRFGP RRSRTSSPPT TRQYATHPSG VMENPPPRRW  60
PPGFRFSPTD EELVLYFLKR RIASGRPTPY IADVDVYKFH PSHLPERSAL QTGDRQWFFF  120
SRLDRKYPNG SRASRTTGDG YWKATGRDRF VCSGGRSVGN KKTLVYHHGR APRGERTDWV  180
MYEYTILADA LPQAAEAREA YALYKLFQKS GVGPKNGEQY GAPFREEDWL DDEEEHGLPS  240
GAAAHTVTTT TNNCTAAIEE QADRELTVGE LAELLSEFGN DQDQGEAPLD FSTPTSQCQG  300
WFNDAGNKLE SVDTTTVSGA LPVVENVCTD LPLGDIEELL MQISDDQQNS ELLSDFPTSV  360
PELQCQHEDH QVWLDADKGE EVDAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-436118616140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04426.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802095.11e-179NAC domain-containing protein 82-like
TrEMBLA0A2T7EU371e-178A0A2T7EU37_9POAL; Uncharacterized protein
STRINGPavir.J04800.1.p1e-176(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91282840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.14e-67NAC domain containing protein 17