PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc04315.1.g00010.1.sm.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 290aa    MW: 32181.4 Da    PI: 4.4234
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc04315.1.g00010.1.sm.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.91.2e-12251032794
                             NAM  27 k.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWkatgkdkevl 93 
                                           ++++   ++e  +i++++P++Lp  vk++ +  +fF+++ k+y+tg+rk+r+++     + +W++tgk+k+ +
  Zpz_sc04315.1.g00010.1.sm.mkhc  25 AkphpfIQEFIPtVEEEdGICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGTRKRRKINtddlaDVRWHKTGKTKPYK 102
                                     2334332222222455546**********.677888899******************74444666899*******9976 PP

                             NAM  94 s 94 
                                      
  Zpz_sc04315.1.g00010.1.sm.mkhc 103 P 103
                                     5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.32E-1029102IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MSSQLFNHGL ELLLHLMAKH GKAGAKPHPF IQEFIPTVEE EDGICYTHPQ KLPGVKQDGS  60
VSHFFHRTFK AYNTGTRKRR KINTDDLADV RWHKTGKTKP YKPGEKSAQE LTTMNGVESV  120
DEADIPDLLP LPSEEDIGTN EEANGSPEHN PHQVNSPHGI SLEENVAEET AAAPTSEKPE  180
DPANYQSQDP KLWEGDSQFE LLDTQQLAEG LALCDEFLLS QSQTSCGDGD EPKVIKPRLA  240
VYAQLPAEDF KKDLEECQRL GPSDNTNPEL DSEFSQDSFT TWAGGKMVDD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc04315.1.g00010.1.sm.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015640881.12e-97SUPPRESSOR OF GAMMA RESPONSE 1
TrEMBLA0A1E5VWK71e-122A0A1E5VWK7_9POAL; NAC domain-containing protein 8
STRINGONIVA06G11950.18e-97(Oryza nivara)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.19e-40NAC family protein