PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc04236.1.g00040.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 238aa MW: 26570.3 Da PI: 6.0655 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 34.6 | 5.5e-11 | 1 | 28 | 102 | 129 |
NAM 102 lkktLvfykgrapkgektdWvmheyrle 129 ++ktLvfy+grap+g+++dW+mheyrle Zpz_sc04236.1.g00040.1.am.mk 1 MRKTLVFYRGRAPNGHNSDWIMHEYRLE 28 89************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.67E-14 | 1 | 48 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 20.803 | 1 | 48 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MRKTLVFYRG RAPNGHNSDW IMHEYRLETS ENATAPEEGW VVCRVCKKRV ATVQRMSESP 60 PCWFDDHSAG FMPALGSPRQ LLQHHRNTSA AYVGQHQPLY HCKPELEYHH LLPSQEAFLP 120 QLPQLESPNS KPPVYIGHGS GSSLQSSEHS RYTPQQQTMA SAAYMAAVDD SATDWSVLDK 180 FVASQLFSHG DSTSKEPSYS SPVPAFQLTE SNNQEETQDL VDYASTSASG GDQADLWK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc04236.1.g00040.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025825485.1 | 1e-107 | NAC domain-containing protein 7-like | ||||
TrEMBL | A0A2T7F9P2 | 1e-108 | A0A2T7F9P2_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J39804.1.p | 1e-107 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2370 | 38 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 4e-43 | NAC 007 |