PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc03692.1.g00060.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 238aa MW: 26190.3 Da PI: 6.795 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 28.3 | 4.9e-09 | 12 | 109 | 2 | 108 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdL.pkkvkaeekewyfFskrdkkyatgkrknratks 80 ppG+ F+Ptdeel++ yL ++++++ l v i++ +++Pw+L p +r ++ r +r Zpz_sc03692.1.g00060.1.sm.mk 12 PPGLIFDPTDEELIMLYLLPRTRDQADALPGViIDDDAAANAQPWKLfP--------------ERPPHA---PRGRRCDGG 75 8*************************888777588888999******32..............222222...244444455 PP NAM 81 gyWkatgkdkevlsk......kgelvglkktLvf 108 g Wk + + ++ ++ +++ ++k+ L + Zpz_sc03692.1.g00060.1.sm.mk 76 GSWKIQKRRRKDAARhvlrvgGESIRWTKNKLKL 109 5555444433333222333333333445555555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.15E-15 | 10 | 139 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 13.961 | 11 | 168 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-8 | 12 | 123 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MLVAKLFGDD HPPGLIFDPT DEELIMLYLL PRTRDQADAL PGVIIDDDAA ANAQPWKLFP 60 ERPPHAPRGR RCDGGGSWKI QKRRRKDAAR HVLRVGGESI RWTKNKLKLS VGTGTTTGWV 120 RQEHFVDDLP SLRVCRISFA GRGEKRPRLQ PDDSSVPGEP VTRRLRVVAA AADSGSANCT 180 TTSLDHQKPG TADASEGQER RQSALGVAAM PNQEIQDSFG KIQEFTDALE DDEEPHGS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc03692.1.g00060.1.sm.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8717 | 9 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.2 | 6e-08 | NAC domain containing protein 41 |