PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03500.1.g00040.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 804aa    MW: 88317.5 Da    PI: 9.6042
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03500.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.83.1e-473214961128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk................................ 49 
                                   lp GfrFhPtdeelv +yLk+k++g+  +++evi+e+d++k+ePwdLp                                 
  Zpz_sc03500.1.g00040.1.am.mk 321 LPLGFRFHPTDEELVRHYLKRKITGQISSEAEVIPEIDVCKCEPWDLPGtvrlrrfdrllrsscpvlpeynllsvlrffsv 401
                                   699************************9999*****************5589***************************** PP

                           NAM  50 ............kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....kgelvglkktLvfykgrap 114
                                                +++++ ew+fF+++d+ky++g+r+nrat++gyWkatgkd+ ++sk    k++ +g+kktLvf+kgrap
  Zpz_sc03500.1.g00040.1.am.mk 402 arydlnlllvksLIRSDDPEWFFFAPKDRKYPNGSRSNRATEAGYWKATGKDRVIKSKgdkrKQHIIGMKKTLVFHKGRAP 482
                                   **99999988766666888**************************************987666666*************** PP

                           NAM 115 kgektdWvmheyrl 128
                                   kge+  W+mheyr 
  Zpz_sc03500.1.g00040.1.am.mk 483 KGERMGWIMHEYRT 496
                                   ************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-19313374IPR003441NAC domain
PROSITE profilePS5100551.699321517IPR003441NAC domain
PfamPF023651.1E-26322495IPR003441NAC domain
SuperFamilySSF1019414.05E-34412517IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 804 aa     Download sequence    Send to blast
MTAAIAFHQS PCSSCLRSAD GSHEAANRPT TSPAAAGFLR QARLARQQDS SGCLRPEAKQ  60
SRRGRPPPHA SNTGPAKAAA AACKLLVLLP RSNLSYQAGM TIGRDGPVLE QRRGGAWSDK  120
ASPRRARRRR AAAVLSHAAV GCLGPAPPGS FACKDRRRSR HLKPPVRVLI RGGPSRQRQQ  180
PRNTSAPAAG EYFAARSQSQ ARAPGGRGRT AEDGSGRGKD ACWRWSLGRG RMVAAPGRRC  240
WIVEPPTLDG RSRSRGSGAA VLRDGDLERP FFSFCSHSSP PPVALSFAAK YIPRPPRTRP  300
VRSGGSSPPA TKMTVMELRA LPLGFRFHPT DEELVRHYLK RKITGQISSE AEVIPEIDVC  360
KCEPWDLPGT VRLRRFDRLL RSSCPVLPEY NLLSVLRFFS VARYDLNLLL VKSLIRSDDP  420
EWFFFAPKDR KYPNGSRSNR ATEAGYWKAT GKDRVIKSKG DKRKQHIIGM KKTLVFHKGR  480
APKGERMGWI MHEYRTTEPE FECGEQGGYV LYRLFRKQEE KTERSSPEEM DKSGYSPTPS  540
RSSPDNIEAN EEAFTALNKE SPESTIHDSP INLPNSVEAH DVSLTRWLAD RNDNVAANAG  600
ELPDDQAWWE GLSFDPDEPN PQLSGLYDNT PLLPYDTTDP DVLSMGSVVE ESTAEKGEAS  660
DEDDAESTGI TIRSRRPAPS SSATSSCIVT EYLDEAMEES TAEKGSSDED DAESTGITIR  720
SRRPAPNALK AVPEAKSVPR LRKTSEKNDE VSKQEDGVGS PVRAPGKERG FPTHIVLLVL  780
SVALLLLLCV GGVWMSLIAI QVDY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-3732051816166NO APICAL MERISTEM PROTEIN
1ut4_B2e-3732051816166NO APICAL MERISTEM PROTEIN
1ut7_A2e-3732051816166NO APICAL MERISTEM PROTEIN
1ut7_B2e-3732051816166NO APICAL MERISTEM PROTEIN
3swm_A2e-3732051819169NAC domain-containing protein 19
3swm_B2e-3732051819169NAC domain-containing protein 19
3swm_C2e-3732051819169NAC domain-containing protein 19
3swm_D2e-3732051819169NAC domain-containing protein 19
3swp_A2e-3732051819169NAC domain-containing protein 19
3swp_B2e-3732051819169NAC domain-containing protein 19
3swp_C2e-3732051819169NAC domain-containing protein 19
3swp_D2e-3732051819169NAC domain-containing protein 19
4dul_A2e-3732051816166NAC domain-containing protein 19
4dul_B2e-3732051816166NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03500.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820792.11e-142protein NTM1-like 9
TrEMBLA0A0A9PTV81e-143A0A0A9PTV8_ARUDO; NAC019
TrEMBLA0A3L6RM531e-143A0A3L6RM53_PANMI; Protein NTM1-like 9
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51723859
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.12e-63NAC transcription factor-like 9