PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc03398.1.g00020.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 447aa MW: 49838.2 Da PI: 8.8018 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.1 | 2.8e-52 | 17 | 143 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 +pGfrFhPtdeelv++yLk+k+++k++++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t++g+ Zpz_sc03398.1.g00020.1.am.mk 17 MPGFRFHPTDEELVSFYLKRKIQQKPISI-ELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSLRPNRVTAAGF 96 69***************************.89***************9888999*************************** PP NAM 83 Wkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 Wkatg+d++++s+ +++ +glkk+Lvfykgra +g ktdW+mhe+rl Zpz_sc03398.1.g00020.1.am.mk 97 WKATGTDRPIYSSeGTKCIGLKKSLVFYKGRAARGMKTDWMMHEFRL 143 ************956667***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-57 | 16 | 174 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 56.812 | 16 | 174 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.9E-26 | 18 | 143 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009733 | Biological Process | response to auxin | ||||
GO:0045770 | Biological Process | positive regulation of asymmetric cell division | ||||
GO:0048103 | Biological Process | somatic stem cell division | ||||
GO:0048829 | Biological Process | root cap development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 447 aa Download sequence Send to blast |
MEVKNDTNMD KADEIIMPGF RFHPTDEELV SFYLKRKIQQ KPISIELIRQ LDIYKYDPWD 60 LPKLASTGEK EWYFYCPRDR KYRNSLRPNR VTAAGFWKAT GTDRPIYSSE GTKCIGLKKS 120 LVFYKGRAAR GMKTDWMMHE FRLPSPTDPS LPKRPIHKNI PLNDSWTICK IFKKTTSMVQ 180 RGLSHSWGPP FPGATEAEFF SAFQTVQASE LALESSSCSL QPAPPAPSSQ FTSRHGLQGQ 240 QSNPSADGSS CKFINFNGST PLETQNCPLM FPFELPTSQK AAVFPVVFGA QLDHQLHRFV 300 VDSSAEINGD TSSRSQDSST KKSGNGFSVS NSDWEAVGRI NFPFDLGADA SEEWRGRLEE 360 IPSAMGRTGL GVDGERTSQI GLIWRSNGLG LVGSSRHLSW AAYAGRSVGD HYRLFLMGRR 420 PVGGNLHLGL TASWAGYVDG ECREHMG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-50 | 18 | 177 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-50 | 18 | 177 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-50 | 18 | 177 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-50 | 18 | 177 | 19 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-50 | 18 | 177 | 22 | 171 | NAC domain-containing protein 19 |
3swm_B | 1e-50 | 18 | 177 | 22 | 171 | NAC domain-containing protein 19 |
3swm_C | 1e-50 | 18 | 177 | 22 | 171 | NAC domain-containing protein 19 |
3swm_D | 1e-50 | 18 | 177 | 22 | 171 | NAC domain-containing protein 19 |
3swp_A | 1e-50 | 18 | 177 | 22 | 171 | NAC domain-containing protein 19 |
3swp_B | 1e-50 | 18 | 177 | 22 | 171 | NAC domain-containing protein 19 |
3swp_C | 1e-50 | 18 | 177 | 22 | 171 | NAC domain-containing protein 19 |
3swp_D | 1e-50 | 18 | 177 | 22 | 171 | NAC domain-containing protein 19 |
4dul_A | 1e-50 | 18 | 177 | 19 | 168 | NAC domain-containing protein 19 |
4dul_B | 1e-50 | 18 | 177 | 19 | 168 | NAC domain-containing protein 19 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc03398.1.g00020.1.am.mk |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025822140.1 | 0.0 | protein FEZ-like | ||||
TrEMBL | A0A3L6PQ10 | 0.0 | A0A3L6PQ10_PANMI; Protein FEZ-like | ||||
STRING | Si015514m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3366 | 38 | 82 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26870.1 | 2e-95 | NAC family protein |