PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03282.1.g00060.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 834aa    MW: 89676.2 Da    PI: 8.3027
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03282.1.g00060.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.74.3e-16263314154
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkle 54 
                                   + ++GVr++ + grWv+e+r+p   g +  r +lg+f+tae Aa+a++a ++++ 
  Zpz_sc03282.1.g00060.1.am.mk 263 PVFRGVRRRGNAGRWVCEVRVP---GrRDCRLWLGTFDTAEAAARAHDASMLAIA 314
                                   579******************9...7444********************998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-11263314IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-26264325IPR001471AP2/ERF domain
SMARTSM003801.7E-15264329IPR001471AP2/ERF domain
PROSITE profilePS5103220.666264323IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-17264325IPR016177DNA-binding domain
CDDcd000181.79E-10265325No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 834 aa     Download sequence    Send to blast
MQVAAGSHEI SIRGLGKPPL GSGDATHHSR HPGRSAAAEP DPNPTLNLII HLGPCLRRDK  60
VTTAANRQLP KPRVWTQRTD NSSLQAAERH APSPSLRLAH GRPLPRAKRQ RQLVKKILAV  120
LRTSRSPETP RPTESAAVDR LARAGSAGRP ARVWGLGSPH LLCLAPSPRF ALCSAPTFTY  180
KYVTSNPPCP SQYPQLEPHQ QTHPKHLRIQ ELDLSKMCPI KKEMLSSDSS SPCSSTSSEH  240
QTVWTAPPKK PAGRTKFRET RHPVFRGVRR RGNAGRWVCE VRVPGRRDCR LWLGTFDTAE  300
AAARAHDASM LAIAGAGACL NFADSAWLLA MPASYRNLDD VRHAVAEAVE EFQRRELNAV  360
ATPPSSANSC NDDDSTTDGE ESSPPPAAED DAVFELDVFN DMSWDLYYAS LAQGMLMEPP  420
CAMAAFGDDG EAHEAAFPAC LTEKIGHSES PKAKKTAAAK AKAPLPRPRE EKTAGPPIFF  480
SAAGAWVGWE RAPSPSPRSA VWAGAAGPVD VRARGAGSWE AGSTRKPQES VGSQLCPRHG  540
SSASEERTSD HSLKSQAAAQ AQESTSLHVS TLGSQLDQTT RTRHPRAAPA TMDMGLHEHS  600
SSSSSSASSS SETKAASWSS SPQPAKKRPA GRTKFRETRH PVFRGRREPA GASGDAVDEV  660
TSNASEPSAA PGISVPRFHA TAPEGERVPA KKADEPAAVD GVVFEPDWFG DMGLDTYYAN  720
LAEGLLMEPP PPPAAWEHGD CGDGAADVAL WSLRSAVPFP VRAELAHRRV SAIDAPSSST  780
EEYMTVWSAP ERTEYSGSTN KSSVDRHKAN LPACLNVMAD SREKVFLVLA YWAD
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03282.1.g00060.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ8057511e-113FJ805751.1 Zea mays DRE-binding protein 3 (DBP3) mRNA, complete cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19636261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.11e-29C-repeat/DRE binding factor 2