PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc03080.1.g00040.1.am.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 231aa    MW: 26106.2 Da    PI: 5.998
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc03080.1.g00040.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.51.6e-1648954128
                             NAM  54 eekewyfFskrdkkyatgkrknra..........tksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektd 120
                                     + + ++fF++  k+y  g+rk+r            ++ +W++tgk+k++++ +g ++g kk+Lv+yk   r  ++e++ 
  Zpz_sc03080.1.g00040.1.am.mkhc   4 DGNIVHFFHRVLKAYGCGQRKRRRvitctdhtvsDEHMRWHKTGKSKAIYN-NGVKKGWKKILVLYKTpqRGGRPERAP 81 
                                     45567******************6588888876545788************.999***********7533666778*** PP

                             NAM 121 Wvmheyrl 128
                                     Wvmh+y+l
  Zpz_sc03080.1.g00040.1.am.mkhc  82 WVMHQYHL 89 
                                     ******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.4251108IPR003441NAC domain
SuperFamilySSF1019412.75E-193108IPR003441NAC domain
PfamPF023651.1E-5989IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MKKDGNIVHF FHRVLKAYGC GQRKRRRVIT CTDHTVSDEH MRWHKTGKSK AIYNNGVKKG  60
WKKILVLYKT PQRGGRPERA PWVMHQYHLG EEEDEKDGEL VLSKVFYQLP TKHKENAEAE  120
TDDEEPDAFA AGIGPKTPKT NTPQPRRANN SPCETEHNAS ILLDQDEELT IPIVGPDDDD  180
VGNHALCTGE TQIVGEALRA QPSLDESLLC LEDPEIQFGS QESIGSWLDR I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226RKRRR
22327KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc03080.1.g00040.1.am.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025818203.16e-98SUPPRESSOR OF GAMMA RESPONSE 1-like isoform X1
RefseqXP_025818210.12e-98SUPPRESSOR OF GAMMA RESPONSE 1-like isoform X2
TrEMBLA0A3L6QEE76e-98A0A3L6QEE7_PANMI; NAC domain-containing protein 73-like
STRINGPavir.Aa01341.1.p7e-99(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14490.16e-29NAC domain containing protein 85