PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02761.1.g00040.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB_related
Protein Properties Length: 232aa    MW: 25765.2 Da    PI: 9.8459
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02761.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.93.2e-10198229132
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg 32 
                                   +g+WT eEd++l d+++++G g+W++ ++  g
  Zpz_sc02761.1.g00040.1.am.mk 198 KGPWTLEEDQKLMDYIQKHGHGSWRALPKLAG 229
                                   79************************999877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-12189227IPR009057Homeodomain-like
PROSITE profilePS5129413.617193232IPR017930Myb domain
SuperFamilySSF466899.33E-9195227IPR009057Homeodomain-like
PfamPF002491.9E-8198229IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MVTLSTCPLL VFRFSKHNMI EPIDHQSIRR QRRSRRIANQ KYAAYERTSW SRREGDARGD  60
DDEAQTLSLP ALPHANVARV ACMGKLSRHL GEHVELIASN LRANRQKHGG RLISRALEAN  120
PGFAEFSASS VGEIWGSPAG WIKMCSGDQP SKLSSRKFSG SQEEAACLPP SQLHHSTPVL  180
SHLSMGRAPC CDENGLKKGP WTLEEDQKLM DYIQKHGHGS WRALPKLAGS HV
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02761.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3306022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.16e-24myb domain protein 93