PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02732.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 467aa    MW: 49589.9 Da    PI: 8.2404
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02732.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.61.7e-092733061955
                           AP2  19 IrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   Irdp++   + r++lg+f+ta+eAa a+++a+++++g
  Zpz_sc02732.1.g00010.1.am.mk 273 IRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 306
                                   899854...59***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.892240314IPR001471AP2/ERF domain
SMARTSM003803.1E-11260320IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-17272314IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-11273314IPR016177DNA-binding domain
CDDcd000181.18E-14273313No hitNo description
PfamPF008476.4E-5279306IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MASAPSGWGD WVSDAGACTA RRASGAGVDA VSHVAAGQPP RRGSWSQDVA SVSGSSLSTS  60
RLVQQGKAHA GSPSPDRPGA QCGGDTSLAE DTATRTTLVL FPSRTLSDRV CLSRPVYDYH  120
SYPIPAHLLH RMRARAGTAI EMMCWSSSFR YSSCGAKWSS VADCATRPHV RAGRQGYGPR  180
LAPRRMVIRT SSGAQAAFRK EAADRRSCDA RAHLVLVSFC SNIGTGVLQH VHVPSFHLIL  240
YRSLDHRSAA ADPKDLGRST SLHRTHYLAS LSIRDPTTKE RHWLGTFDTA QEAALAYDRA  300
ALSMKGAQAR TNFVYAHAAA AYSNNCPPFL AHPSTCGHAP SSTVHQYGGQ QHSVGASSSD  360
NGSYHHHCYY SQSPAGSGER SMPLGVDRAD GSLLAGGHDL LFSRADDNSG AAAAEDLRRF  420
SDADAYGMLG LREDVDDMVA GFWAGAGDAE QLGAEMVASS SQGFLSH
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02732.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7278729e-63KJ727872.1 Zea mays clone pUT5965 AP2-EREBP transcription factor (EREB183) gene, partial cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP105252838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.11e-20ERF family protein