PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02731.1.g00040.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB
Protein Properties Length: 821aa    MW: 88366.7 Da    PI: 9.0066
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02731.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.36.4e-171461148
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                  +g+WT+eEd+ lv +v+++G+g+W++++   g+ R+ k+c++rw +yl
  Zpz_sc02731.1.g00040.1.am.mk 14 KGPWTPEEDLVLVSYVQEHGPGNWRAVPTNTGLMRCSKSCRLRWTNYL 61
                                  79********************************************97 PP

2Myb_DNA-binding48.81.7e-1567112148
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                   rg++T +E++l++++  +lG++ W++Ia++++  Rt++++k++w+++l
  Zpz_sc02731.1.g00040.1.am.mk  67 RGNFTDQEEKLIIHLQVLLGNR-WAAIASYLP-ERTDNDIKNHWNTHL 112
                                   89********************.*********.************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-23564IPR009057Homeodomain-like
PROSITE profilePS5129418.468961IPR017930Myb domain
SuperFamilySSF466892.02E-2911108IPR009057Homeodomain-like
SMARTSM007174.0E-131363IPR001005SANT/Myb domain
PfamPF002491.3E-151461IPR001005SANT/Myb domain
CDDcd001677.95E-111661No hitNo description
PROSITE profilePS5129425.02462116IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.4E-2365117IPR009057Homeodomain-like
SMARTSM007171.0E-1566114IPR001005SANT/Myb domain
PfamPF002494.2E-1467112IPR001005SANT/Myb domain
CDDcd001677.22E-1169112No hitNo description
ProDomPD1257747.0E-24732811IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047702.8E-27752804IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015662.9E-20753802IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152324.361754803IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 821 aa     Download sequence    Send to blast
MGRPPCCDKV GVKKGPWTPE EDLVLVSYVQ EHGPGNWRAV PTNTGLMRCS KSCRLRWTNY  60
LRPGIKRGNF TDQEEKLIIH LQVLLGNRWA AIASYLPERT DNDIKNHWNT HLKKKLKKMQ  120
AGESGGGDQD GVRVSESAGA GDRVGGEKRP TVHKGQWERR LQTDIHTARQ ALREALSLEP  180
SPPAKMAPLP TPAGSATYAS SAENIARLLE GWLRPGSGCG KGPETSGSTS TTGTTQQRPQ  240
CSGEGAASAS ASHSGGTTAM AVQTPECSTE TSKMVGAAGA GAPPAFSMLE NWLLDDGLAH  300
GELGLIDVVP LGDPSMARCT GAGQWDCHGD ACMFLLLLHG YARVKQSQPQ EKIGKEKSES  360
KEQRNKRPGR PGRAECNAMR PWKRTGTGFN AGSVGCRFCR APLSFSPCLL SPACSQEDSG  420
RPSPGRHCPP APCIMQACGG TPNLIQSSWQ AEELRVMGLN AEQKGHRRGV NARPTHDPAR  480
QLRPYTVYSY YSAASEESRA GSSFIIQFSA LLCLFSFTMN VNVRLGGSNG LRNVCVRASG  540
RRGKEGRTHA VEGQWRVPSA HLVGGLNAPA LPAPSLIDLK ALSPLITAAP LRSRNGMELN  600
GPSEADAGDG IRRRRDGETS APPTDKRART YCCRPAGSAR SIDRNSRGAV GVRSGTVRSI  660
LSDRIEAIGA RYERPAVASP TRRISPVSHD DVGGGGGDSY LPVVHSEQGL HSPCAETRLW  720
LAGWEEEGKL TMKRLLILRR CEPIVRFTCC SVRYGECRRN HAATTGGYSV DGCREFIAEG  780
EEGTGGALKC AACGCHRSFH RRVQVYEVSW DYAASDSSST E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C7e-26141164105C-Myb DNA-Binding Domain
1msf_C7e-26141164105C-Myb DNA-Binding Domain
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02731.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJF9519141e-150JF951914.1 Aegilops tauschii clone TaMYB31 R2R3-MYB protein mRNA, complete cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22938296
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.13e-92myb domain protein 94