PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc02705.1.g00080.1.sm.mkhc

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 353aa MW: 37120 Da PI: 8.2813

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc02705.1.g00080.1.sm.mkhc	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	209.3	1e-64	13	161	2	148
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..ee 78 g++r ptw+ErEnn+rRERrRRaiaaki+aGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+ Zpz_sc02705.1.g00080.1.sm.mkhc 13 GGTRVPTWRERENNRRRERRRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPlaER 91 789***********************************************************************999 PP DUF822 79 aeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvss 148 ++ +g+sas sp+ss+q +sp++sy++sp+sssfps+ s+++i+l + +sl+p+l++ls++ss Zpz_sc02705.1.g00080.1.sm.mkhc 92 HDPIGRSASPSPCSSYQ--------PSPRASYNPSPASSSFPSSGSSSHITLGGNnfiggvegSSLIPWLKNLSSSSS 161 ***************........9********************9998899*9*******998655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.2E-70	13	157	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence Send to blast
MTNGAGGGSG GLGGTRVPTW RERENNRRRE RRRRAIAAKI FAGLRAYGNY NLPKHCDNNE 60 VLKALCNEAG WTVEPDGTTY RKGCKPPLAE RHDPIGRSAS PSPCSSYQPS PRASYNPSPA 120 SSSFPSSGSS SHITLGGNNF IGGVEGSSLI PWLKNLSSSS SFASSSKFPQ LQHLYFNGGS 180 ISAPVTPPSS SPTRTPRIKT DWENPTVQPP WAGANYASLP NSTPPSPGHQ VAPDPAWLAG 240 FQISSAGPSS PTYSLVAPNP FGIFKETVAG SSRMCTPGQS GTCSPVMGGV PAQHDVQMVD 300 GAPDDFAFGS SSNGNIESSG LVKAWEGERI HEECASDELE LTLGSSKTRA DPS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence Send to blast

MTNGAGGGSG GLGGTRVPTW RERENNRRRE RRRRAIAAKI FAGLRAYGNY NLPKHCDNNE  60
VLKALCNEAG WTVEPDGTTY RKGCKPPLAE RHDPIGRSAS PSPCSSYQPS PRASYNPSPA  120
SSSFPSSGSS SHITLGGNNF IGGVEGSSLI PWLKNLSSSS SFASSSKFPQ LQHLYFNGGS  180
ISAPVTPPSS SPTRTPRIKT DWENPTVQPP WAGANYASLP NSTPPSPGHQ VAPDPAWLAG  240
FQISSAGPSS PTYSLVAPNP FGIFKETVAG SSRMCTPGQS GTCSPVMGGV PAQHDVQMVD  300
GAPDDFAFGS SSNGNIESSG LVKAWEGERI HEECASDELE LTLGSSKTRA DPS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	3e-24	16	86	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	3e-24	16	86	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	3e-24	16	86	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	3e-24	16	86	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00248	DAP	Transfer from AT1G78700	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc02705.1.g00080.1.sm.mkhc

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025813584.1	0.0	protein BZR1 homolog 3
Swissprot	Q5Z9E5	0.0	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A1E5VA88	0.0	A0A1E5VA88_9POAL; Protein BZR1-like protein 3
STRING	Pavir.J12085.1.p	0.0	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	3e-66	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]