PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02699.1.g00060.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family MYB
Protein Properties Length: 604aa    MW: 66881.2 Da    PI: 10.6319
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02699.1.g00060.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.81.2e-08225271347
                                   SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 
                                    WTteE + + +a ++   +   +W++ a++++ ++t  ++ ++++++
  Zpz_sc02699.1.g00060.1.am.mk 225 TWTTEENKVFEKALALIDRNapdRWEKMASMLP-RKTVADVMNHYNDL 271
                                   7*****************99*************.***********986 PP

2Myb_DNA-binding42.71.3e-13332376347
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                   +WT++E++l++++ +++G g W+ Ia ++ ++Rt+ q+ s+ qky
  Zpz_sc02699.1.g00060.1.am.mk 332 PWTEDEHKLFLQGLRKYGRGYWRNIALHFVTTRTPTQVASHAQKY 376
                                   8*******************************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512937.521221275IPR017884SANT domain
SMARTSM007172.2E-7222274IPR001005SANT/Myb domain
SuperFamilySSF466896.39E-10224278IPR009057Homeodomain-like
CDDcd001674.00E-6225271No hitNo description
PfamPF002494.9E-6225271IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.0E-4225271IPR009057Homeodomain-like
PROSITE profilePS5129419.295325381IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.9E-10325376IPR009057Homeodomain-like
SuperFamilySSF466892.87E-16327381IPR009057Homeodomain-like
SMARTSM007174.5E-11329379IPR001005SANT/Myb domain
TIGRFAMsTIGR015571.6E-15329379IPR006447Myb domain, plants
CDDcd001672.09E-9332377No hitNo description
PfamPF002498.4E-12332376IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 604 aa     Download sequence    Send to blast
MNKSAVDTSP ARGRDSYLAN ALPRGGRGMV RDSEGFVDGG SNRGRRTPRR PLDEPNPPKR  60
DTPPEMDVPA AASVERSVPE YGRRMDPLVA AATVQERALS RSLGGELRLE RPLSPPRRQN  120
PITSIHSRAF SSRPATVELE YNSGHLGIHP ELDTSLLYST PTPHSASLFS LFRLLRHQPA  180
QVPVAKMMAE TWTQMLLPTT GLWFSGQSCC PWPDRHAGGG IGGDTWTTEE NKVFEKALAL  240
IDRNAPDRWE KMASMLPRKT VADVMNHYND LENDVGFIEA GLVSFPHYSS SPSPPSSGFT  300
LDHWDGSDGG FRRGCGLKRG RGPGQERRKG VPWTEDEHKL FLQGLRKYGR GYWRNIALHF  360
VTTRTPTQVA SHAQKYFIRL QSGGKDKRRP SIHDTTTANL SLPNDDHGNI SPSPSSALNT  420
ASNPTGGADQ FGALTDVKPF IPPFPGVAHP YTNQAFDEGF GSSLVSLVGG LPAWFRIQDR  480
SAMNHLAACG SAVSPWTVSP LHLFRVEAPG DEVRHRRSRQ QASRQSASRV ACITDRIWRW  540
CCLSLMSRSG WGRRGQALLP TWSRQHRVVE RGRHDKRRRR GWVVVAVQCG WRVETRSSGG  600
HSTG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A3e-12223291876RADIALIS
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02699.1.g00060.1.am.mk
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22743796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.13e-65Homeodomain-like transcriptional regulator