PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc02597.1.g00100.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ZF-HD | ||||||||
Protein Properties | Length: 607aa MW: 64323.9 Da PI: 9.1352 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 32 | 3e-10 | 470 | 490 | 36 | 56 |
ZF-HD_dimer 36 gtaaalkCaACgCHRnFHRre 56 +++al+Ca CgCHRnFHR e Zpz_sc02597.1.g00100.1.am.mk 470 LHIDALRCATCGCHRNFHRIE 490 4699***************76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 1.7E-7 | 471 | 490 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 3.0E-4 | 472 | 493 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 607 aa Download sequence Send to blast |
MHVAVVADVG RQDGRTELLA RSVPRAASLS SGAYMHAAPA PTDRSRGGPT SLHAAYMHGS 60 RRVSVARTSR ALSLLGGRLV TGREGAGART DWQGAVEPDT VARMSTSDRP AVPQKRAVRS 120 SELRPRVETD KPRGKGLCML SSSLVTHACA LLLPPPPNLR IDDQSGLVAS NKPTMHGSWR 180 ARKVGAVRCV PFVGRTITLT PPPPRAAAAT APPSHLVAAT AVPSPLLQCC AGLHRYPVVP 240 VSDATTFTSS LQLPCHREKE RGSRRLDVTV VASETGITGG GDEMRGRHAV VPWRRRHVVV 300 AASKLWFNPL DPKDRMELNQ LLYNPISGDP TESFSGPDGC MGAGPRVNTL LLCSHNETAV 360 IPVYPAYLPP CPGRSMRLYI AVAELYPTVN EDLVMDFDEH DDGDDEEMQQ PMPVSSSYDT 420 PMQPGLVLGG GGGTPKPEDS RGSASFRTAG PGGGDGAGAG TTRYRERGGL HIDALRCATC 480 GCHRNFHRIE SGSPTTAEPA ALLSPAAVTA YGVATQHPFS TYYRTPTGYL YHHQHQQHLA 540 AAAAGHMQRP LALPSTSHSG GRDEGDDVSG MIRPACMVVA PLVGMSLGSG SGGQSGSGMK 600 RFRTKFT |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc02597.1.g00100.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP48789 | 2 | 3 |