PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02535.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 563aa    MW: 61870.5 Da    PI: 9.6595
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02535.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.43e-322253651128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyat 70 
                                   lp+G++F+Ptd+el+ e+L+ k++ +       +   +    +i+   +i++++P++Lp  v ++    +fF++ +k+y+t
  Zpz_sc02535.1.g00030.1.am.mk 225 LPAGVKFDPTDQELL-EHLEGKARPDVcklhplI---DefipTIEGEnGICYTHPERLP-GVGKDGLIRHFFHRPSKAYTT 300
                                   799************.99****999984444332...143333665557**********.555555677************ PP

                           NAM  71 gkrknratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                   g+rk+r+++      + +W++tgk+++v+s +g+l+g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  Zpz_sc02535.1.g00030.1.am.mk 301 GTRKRRKVHtgdqggETRWHKTGKTRPVFS-NGRLKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 365
                                   ******855345544667************.999***********6657999999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.27E-37215384IPR003441NAC domain
PROSITE profilePS5100533.1225384IPR003441NAC domain
PfamPF023652.5E-14226365IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    Send to blast
MLVVIVPRLQ PLLGVSGSHV RTYGLFFRRA NPDRQWTSAS AISIDVHAAT YSRWWVSAQR  60
IDPAPRLVSG SREFAPCLRR SARSSGQQPK PDSEGNRHRS TAPSCSREHG GSIDRVVCLA  120
CVAYRSFLRG SAASLAFAPY GGEEESVARS RGQAEAFLLL SDPLIVEEED KVENNLATVA  180
AIAAAKKQQQ ATSHVNLIRT CPSCGHRTQY EQMQAAATIQ DLPGLPAGVK FDPTDQELLE  240
HLEGKARPDV CKLHPLIDEF IPTIEGENGI CYTHPERLPG VGKDGLIRHF FHRPSKAYTT  300
GTRKRRKVHT GDQGGETRWH KTGKTRPVFS NGRLKGYKKI LVLYTNYGKQ RKPEKTNWVM  360
HQYHLGPDEE EKDGELVVSK VFYQTQPRQC GGGGSMTTAK DAAPLPAATD HHQHDGANSM  420
LKAPGIVDFY SPAELSSYNQ AAPNSRAAAS AHLIPNFEVH RAGAAGFVFG RHTLLVGGHK  480
PAVGGANPYT ALDRRLAGSG RRPSAALHTG SRFIGRLLAL NLSQVNSEFD QGVHRNQNTD  540
EQESGTCNQH KRWNSDWEQS LRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc02535.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1027940.0AK102794.1 Oryza sativa Japonica Group cDNA clone:J033108B03, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969491.11e-174NAC domain-containing protein 73
TrEMBLA0A2T7DIP11e-173A0A2T7DIP1_9POAL; Uncharacterized protein
STRINGSi002301m1e-174(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP30753786
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-115NAC domain containing protein 73