PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zpz_sc02126.1.g00100.1.am.mk

Organism

Zoysia pacifica

Taxonomic ID

1070856

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Nin-like

Protein Properties

Length: 787aa MW: 86351 Da PI: 4.8598

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zpz_sc02126.1.g00100.1.am.mk	genome	ZGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	37.2	5.7e-12	675	723	3	50
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGI.kRWPhRkik 50 +++++ d F+l+ k+AAk+L+++++ LKr C ++G +RWP R+i+ Zpz_sc02126.1.g00100.1.am.mk 675 ANVTMADATCLFHLSRKEAAKHLKISPSSLKRLCNRNGAgHRWPARRIN 723 68889999999*********************9999868****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.651	659	745	IPR003035	RWP-RK domain
Pfam	PF02042	1.2E-12	676	723	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence Send to blast
MAHKDLPLCV RFRSQSIRFR AETLASAPRP AGTRKLPHPE QAPLRAVLTR PLAAAVSNPF 60 HTPAARRLAI PVAALRFSPC PNIPVPAPLA VATMSDEVYE VEYDVRRYQC QHIPLPDPPH 120 QVLAGSDEAP VGEPQHMPPV DHALQAPPTL NPGPAPVPAT TGFEAPAVDV IERYQTPAIK 180 AEYYQAPPID PEHCQAPPTD DFEHYLHTLP ARDIEHHHHA PPTIDSEHCH YQQAPAMDIE 240 QPQMLAPEQA FGFPEPPLQV AAGVDYDALP SENYQAPLTA DVEHYQEPPT IGFEHHQRGP 300 AMDIEPPQML APEQVFGFPE SPLMEPAGVD FDDLPSGNYQ APPTADVEHY RAPPTIDVEH 360 YQQAPAMDIE PLQMVPPEQS FVFPESPLLA ADEFDFDTLP SFDEGMLHEA PAGTGSPLLY 420 DQSLVNDEQD EVATFTEGIE ASNDTGGAAV AEVEPDVRPP IDEDNLIFVP FVPGQLDCTD 480 CCTVRELLHE SANHKLFLMV HGADHGPVFH HAIIDRTYIC ADGETKTNEL TYLDLRQRTH 540 HWVQCFIASW LQVLRDDTSG QLKDSWSAFS AAAAGTNNIG TTFPVNNAAH MELEIDMLKK 600 ILSEPSANDK EAAAPLAPEA SHQAITPQGV EISQNNQNDW HGLDVPILDS SNLDAEDGSP 660 SEHASLLAVQ RKRIANVTMA DATCLFHLSR KEAAKHLKIS PSSLKRLCNR NGAGHRWPAR 720 RINGINTKIK KLEEAAARNG GRIGMMAIRE KLGKLKLERA QLYASTMKSI RENEMNKGAG 780 SSGSKKL

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence Send to blast

MAHKDLPLCV RFRSQSIRFR AETLASAPRP AGTRKLPHPE QAPLRAVLTR PLAAAVSNPF  60
HTPAARRLAI PVAALRFSPC PNIPVPAPLA VATMSDEVYE VEYDVRRYQC QHIPLPDPPH  120
QVLAGSDEAP VGEPQHMPPV DHALQAPPTL NPGPAPVPAT TGFEAPAVDV IERYQTPAIK  180
AEYYQAPPID PEHCQAPPTD DFEHYLHTLP ARDIEHHHHA PPTIDSEHCH YQQAPAMDIE  240
QPQMLAPEQA FGFPEPPLQV AAGVDYDALP SENYQAPLTA DVEHYQEPPT IGFEHHQRGP  300
AMDIEPPQML APEQVFGFPE SPLMEPAGVD FDDLPSGNYQ APPTADVEHY RAPPTIDVEH  360
YQQAPAMDIE PLQMVPPEQS FVFPESPLLA ADEFDFDTLP SFDEGMLHEA PAGTGSPLLY  420
DQSLVNDEQD EVATFTEGIE ASNDTGGAAV AEVEPDVRPP IDEDNLIFVP FVPGQLDCTD  480
CCTVRELLHE SANHKLFLMV HGADHGPVFH HAIIDRTYIC ADGETKTNEL TYLDLRQRTH  540
HWVQCFIASW LQVLRDDTSG QLKDSWSAFS AAAAGTNNIG TTFPVNNAAH MELEIDMLKK  600
ILSEPSANDK EAAAPLAPEA SHQAITPQGV EISQNNQNDW HGLDVPILDS SNLDAEDGSP  660
SEHASLLAVQ RKRIANVTMA DATCLFHLSR KEAAKHLKIS PSSLKRLCNR NGAGHRWPAR  720
RINGINTKIK KLEEAAARNG GRIGMMAIRE KLGKLKLERA QLYASTMKSI RENEMNKGAG  780
SSGSKKL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Zpz_sc02126.1.g00100.1.am.mk

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14429	10	12

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	1e-08	Nin-like family protein