PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01968.1.g00060.1.am.mkhc
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 358aa    MW: 39455.8 Da    PI: 5.647
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01968.1.g00060.1.am.mkhcgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.25.7e-184913651128
                             NAM  51 vkaeekewyfFskrdkkyatgkrknra.......tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektd.. 120
                                     +k++ ++ +fF++  ++y  g+rk+r+       +++ +W++tgk+k v++++g+  g kk+Lv+y+g+++ g ktd  
  Zpz_sc01968.1.g00060.1.am.mkhc  49 IKTDGSSRHFFHRITNAYGCGHRKRRKidnnertASEVRWHKTGKSKVVYDENGSMRGWKKILVLYTGSKNGGGKTDka 127
                                     45667788*****************98677777555899***************************9988877655444 PP

                             NAM 121 .Wvmheyrl 128
                                      Wvmh+y+l
  Zpz_sc01968.1.g00060.1.am.mkhc 128 gWVMHQYHL 136
                                     4******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.4081155IPR003441NAC domain
PfamPF023656.9E-839136IPR003441NAC domain
SuperFamilySSF1019414.71E-2250155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
WCKRNLPLEG SRGGVLLARR DRSIDRSCGV ACSQMTRLIG YLAQPICGIK TDGSSRHFFH  60
RITNAYGCGH RKRRKIDNNE RTASEVRWHK TGKSKVVYDE NGSMRGWKKI LVLYTGSKNG  120
GGKTDKAGWV MHQYHLGVDE AEKDGQFVVC KIFYQLALKQ IDKSEMNLSV AEHDASSVKI  180
DPRTPKTDPQ TVHGEAESST SNFRIKDEDE QPVWYPKLSQ NFEDTTQPDV KESGVTGMQT  240
FGPGSGSGSG VLTFLDKGTS TVSSMQVVEP DASPNSQFNR SWESGAQVTL DEPTQLIEVT  300
ENNRLEEPMH DGLPNEDTLC TGAPADYNTL AGLGSGLQDS LDIDAMLESF YSSDADGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11522LLARRDRS
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01968.1.g00060.1.am.mkhc
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4861622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.14e-35NAC family protein