PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01941.1.g00120.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 376aa    MW: 40397.1 Da    PI: 8.6943
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01941.1.g00120.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.5e-16219268355
                           AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr ++ +g+++AeIrd    + k +r++lg+f+++e Aa a+++a+ + +g
  Zpz_sc01941.1.g00120.1.am.mk 219 FIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDSPEAAALAYDQAAFSVRG 268
                                   67******.**********32..2.24**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.588218276IPR001471AP2/ERF domain
SMARTSM003808.8E-32218282IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-27219276IPR001471AP2/ERF domain
CDDcd000181.49E-15219278No hitNo description
SuperFamilySSF541712.42E-20219277IPR016177DNA-binding domain
PRINTSPR003671.3E-7219230IPR001471AP2/ERF domain
PfamPF008479.7E-12220268IPR001471AP2/ERF domain
PRINTSPR003671.3E-7242258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MDPLHRAGTS MAGRIDVYFR ERCGAPGRAR PFTTRPHQTP ATSACVDAAS RKQHKPLHHL  60
SYIDLALVTG LRSYPAALRH RTVGFGHVPT SMEPGPTQVR DSYKTRAGSP CWPAERLPLL  120
CFSTTTLHTS SRNELACLND PFYSMDPYAS SCMFSHPCAG EISGLVEFTA GGFDDDSASA  180
SCSEESSSSA GNGNSNSSTG VHDKEETKQQ QRSNDKQPFI GVRKRPWGKF AAEIRDSTRK  240
GARVWLGTFD SPEAAALAYD QAAFSVRGAA AVLNFPVDRV QDSLRALALS SSTSAGAGSP  300
VLALKSRHSL RKRSPNKNKT RPRSEAASVA PQQQPPCTGG GGVVELEDLG ADYLDELLRV  360
SSQSEAERTL LSCAPK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-232192761572Ethylene-responsive transcription factor ERF096
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01941.1.g00120.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-34ethylene response factor 1