PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01829.1.g00010.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 510aa    MW: 55470.8 Da    PI: 9.034
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01829.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-18287336255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +ykGVr++k +grWvAeIr p++   r r++lg+++t+e+Aa+a +aa  +l+g
  Zpz_sc01829.1.g00010.1.am.mk 287 RYKGVRRRK-WGRWVAEIRLPNS---RDRIWLGSYDTPEKAARAFDAAFVCLRG 336
                                   7*****998.**********933...5*********************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd003204.64E-8234IPR020818GroES chaperonin family
Gene3DG3DSA:2.30.33.406.4E-6235IPR020818GroES chaperonin family
PfamPF001665.4E-5233IPR020818GroES chaperonin family
SuperFamilySSF501291.18E-2441132IPR011032GroES-like
HamapMF_0058019.80441135IPR020818GroES chaperonin family
Gene3DG3DSA:2.30.33.401.4E-3041132IPR020818GroES chaperonin family
SMARTSM008831.6E-3641134IPR020818GroES chaperonin family
PROSITE patternPS0068104266IPR018369Chaperonin GroES, conserved site
PRINTSPR002971.5E-204257IPR020818GroES chaperonin family
PfamPF001666.5E-2642133IPR020818GroES chaperonin family
CDDcd003201.08E-3343133IPR020818GroES chaperonin family
PRINTSPR002971.5E-206485IPR020818GroES chaperonin family
PRINTSPR002971.5E-2099111IPR020818GroES chaperonin family
PRINTSPR002971.5E-20121134IPR020818GroES chaperonin family
SMARTSM003804.6E-30287352IPR001471AP2/ERF domain
PROSITE profilePS5103222.708287346IPR001471AP2/ERF domain
CDDcd000181.25E-25287348No hitNo description
PfamPF008471.5E-11287335IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-26287347IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-18287347IPR016177DNA-binding domain
PRINTSPR003671.5E-8288299IPR001471AP2/ERF domain
PRINTSPR003671.5E-8310326IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006457Biological Processprotein folding
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
AGAQVVYSKY AGTEVEFNGA KHLILKVDDI IGILETDDVK DMKPLNDRVL IKVAEAEDKT  60
PGGLILTDTA KEKPSIGTVV AVGPGPLDEE GKRQPLSVPT NSTVLYSKYA GSEFKGADGT  120
GYIVLKASDV HTVKFRKAGA VADRPINVPL GSVTAHATHL VFNERAFYRA WAAGVNLPPD  180
RSTYGRNEAR EAASVEPPRV HGVRNGPMWS RKPCYYELPK CQGYPVVPTS REGSLPPIKQ  240
LPPHTQSVAD VRSRAELMPP PYDRMLTSPQ EQEHQHARLP SSGDVRRYKG VRRRKWGRWV  300
AEIRLPNSRD RIWLGSYDTP EKAARAFDAA FVCLRGPGAA DGLNFPSSPP AVARTSDVDE  360
VYAVAVSYGN NHDTAMVARE EAAIDPPPPR DSMLPADNNV AAAAVPPRQL QVSTERLDCW  420
SEFVNNPPPL YSPTWTGSHE HLLPVPSRPR VVKPKPPSCH LAEARLDSAA GVIHASPGRS  480
SPRLRCSQVP TTSAAPIVAA SSERLRDTLH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1hx5_B2e-224113349610 KDA CHAPERONIN
1hx5_C2e-224113349610 KDA CHAPERONIN
1hx5_D2e-224113349610 KDA CHAPERONIN
1hx5_E2e-224113349610 KDA CHAPERONIN
1hx5_F2e-224113349610 KDA CHAPERONIN
1hx5_G2e-224113349610 KDA CHAPERONIN
1p3h_A2e-224113349610 kDa chaperonin
1p3h_B2e-224113349610 kDa chaperonin
1p3h_C2e-224113349610 kDa chaperonin
1p3h_D2e-224113349610 kDa chaperonin
1p3h_E2e-224113349610 kDa chaperonin
1p3h_F2e-224113349610 kDa chaperonin
1p3h_G2e-224113349610 kDa chaperonin
1p3h_H2e-224113349610 kDa chaperonin
1p3h_I2e-224113349610 kDa chaperonin
1p3h_J2e-224113349610 kDa chaperonin
1p3h_K2e-224113349610 kDa chaperonin
1p3h_L2e-224113349610 kDa chaperonin
1p3h_M2e-224113349610 kDa chaperonin
1p3h_N2e-224113349610 kDa chaperonin
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1288294KGVRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01829.1.g00010.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.11e-30ERF family protein