PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01795.1.g00030.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family DBB
Protein Properties Length: 319aa    MW: 33781.5 Da    PI: 4.7818
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01795.1.g00030.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box20.69.1e-07446541
                      zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                                   C+ +e  e++  C  ++  lC+ C  e H        H++ p
  Zpz_sc01795.1.g00030.1.am.mk  4 LCSSCEAAEASVLCCADDAALCARCDREVHAAnrlagkHQRLP 46
                                  7******99*********************6577888998877 PP
2zf-B_box26.99.8e-0960100337
                      zf-B_box   3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 
                                   +++C+ ++e  + +fC +++ llC++C ++ H        H
  Zpz_sc01795.1.g00030.1.am.mk  60 PPRCDICQECDAYFFCLEDRALLCRSCDVAVHTAndfvsaH 100
                                   57999999988********************9554555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011911.021147IPR000315B-box-type zinc finger
SMARTSM003361.4E-10147IPR000315B-box-type zinc finger
CDDcd000218.44E-7346No hitNo description
SMARTSM003362.2E-1358105IPR000315B-box-type zinc finger
PfamPF006434.9E-76192IPR000315B-box-type zinc finger
CDDcd000212.05E-862105No hitNo description
PROSITE profilePS501199.05863105IPR000315B-box-type zinc finger
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009641Biological Processshade avoidance
GO:0009658Biological Processchloroplast organization
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010099Biological Processregulation of photomorphogenesis
GO:0015995Biological Processchlorophyll biosynthetic process
GO:0016607Cellular Componentnuclear speck
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MKVLCSSCEA AEASVLCCAD DAALCARCDR EVHAANRLAG KHQRLPLLAP GAASAAALAP  60
PRCDICQECD AYFFCLEDRA LLCRSCDVAV HTANDFVSAH RRFLLTGVQV GQEQGEDDRS  120
VEQLEPEPQP SPRPPVKRAP PPPFGGQGDF SWAVAAPDAA ASLPDWSAVS EQLGSPAPRH  180
AEALSRNTPK RSPAFGAGQG RVAGGVMDWP LGEFFRGVSD FGGGFGFGES GNSKAEGGSA  240
GGSPNYWSEE EDRDADEFFG QVPEMQWSVP ELPSPPTASG LHWQNGARDS AAFVPDVCSP  300
DASLRWFAAA AAGNKRRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01795.1.g00030.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020395809.11e-160B-box zinc finger protein 22
TrEMBLA0A1D6M0671e-158A0A1D6M067_MAIZE; B-box zinc finger protein 22
TrEMBLA0A3L6E6D11e-158A0A3L6E6D1_MAIZE; B-box zinc finger protein 22
STRINGSi022650m1e-147(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP17943382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.12e-32light-regulated zinc finger protein 1