PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01786.1.g00050.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 532aa    MW: 58464.2 Da    PI: 10.9258
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01786.1.g00050.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM126.42.3e-3951291116
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk 79 
                                   +ppGfrFhP+d+elv +yL +k++g+ +    v +++vd++k+ePwdLp +++ +e +ewyfFs  d+ky+tg+r+nrat+
  Zpz_sc01786.1.g00050.1.am.mk   5 MPPGFRFHPRDDELVLDYLLPKLSGHCHARGGVaMADVDVNKCEPWDLPeECCVSEGNEWYFFSLPDRKYTTGERTNRATR 85 
                                   79************************97776777***************667778899*********************** PP

                           NAM  80 sgyWkatgkdkevlskkgel.......vglkktLvfykgrapkg 116
                                   sgyWkatgkd++v+++++++       vg +ktLvfy+ ++p+g
  Zpz_sc01786.1.g00050.1.am.mk  86 SGYWKATGKDRAVVAADDKTvktpatlVGRRKTLVFYTDERPTG 129
                                   ***************955556677788**********9988877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.23E-393130IPR003441NAC domain
PROSITE profilePS5100537.2235156IPR003441NAC domain
PfamPF023651.5E-186124IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    Send to blast
MEARMPPGFR FHPRDDELVL DYLLPKLSGH CHARGGVAMA DVDVNKCEPW DLPEECCVSE  60
GNEWYFFSLP DRKYTTGERT NRATRSGYWK ATGKDRAVVA ADDKTVKTPA TLVGRRKTLV  120
FYTDERPTGG RRRGPCKSSA SSCRRRHGSE GRVLYKSGTT TPRPASEDQA GLPTSCEPDL  180
PVTAPPVIAA FNAIDGSRTA AEQVSCFSGL PALPFRRPVS RGDGHAMGIS EKQAMGIMSK  240
NSSSQGPEKD SSSPALRSTA SRIAVSMHSS GTTLMSTWRH SVGSSTTTRR HSLQTTSAQN  300
TMSRASSLRK TSCRESLGSA AQSLASGGRE DGEGRFLVRR LQEENIAARV LNLGLKERQA  360
TAARGPLQST DLLAENRRVL SPEERRAGEE ERSLRQDPTN SMVVRAAGWV EWRRRKRRQP  420
RDSGVYRPRS PPRPLQRVEA PELMQEPSSP PLNDGSTRST RAAVKLPALL RAVPARHKPH  480
RTAPPRCHIR PPTCLAPRAP TQIVNVGHFL VVFNLQLLSL SLSSILLTLQ LF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-25513117132NO APICAL MERISTEM PROTEIN
1ut4_B4e-25513117132NO APICAL MERISTEM PROTEIN
1ut7_A4e-25513117132NO APICAL MERISTEM PROTEIN
1ut7_B4e-25513117132NO APICAL MERISTEM PROTEIN
3swm_A3e-25513120135NAC domain-containing protein 19
3swm_B3e-25513120135NAC domain-containing protein 19
3swm_C3e-25513120135NAC domain-containing protein 19
3swm_D3e-25513120135NAC domain-containing protein 19
3swp_A3e-25513120135NAC domain-containing protein 19
3swp_B3e-25513120135NAC domain-containing protein 19
3swp_C3e-25513120135NAC domain-containing protein 19
3swp_D3e-25513120135NAC domain-containing protein 19
4dul_A4e-25513117132NAC domain-containing protein 19
4dul_B4e-25513117132NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01786.1.g00050.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6914822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.22e-42NAC domain containing protein 1