PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01685.1.g00040.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 760aa    MW: 82651.1 Da    PI: 9.9966
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01685.1.g00040.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.46e-494125372128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                                   +pGfrFhPt+eel+ +yL++kveg+++++ + i+++d+y ++Pw+Lp+++  + kew+f+++rd+ky++g+r+nr+t+sgy
  Zpz_sc01685.1.g00040.1.am.mk 412 MPGFRFHPTEEELIEFYLRRKVEGRRFNV-DLIADLDLYCFDPWELPARAVMGGKEWFFYVPRDRKYRNGDRPNRVTASGY 491
                                   79***************************.99***************8777899*************************** PP

                           NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   Wkatg d+ +  ++++ +glkktLvfy+g+apkg++++W+m+eyrl
  Zpz_sc01685.1.g00040.1.am.mk 492 WKATGADRMIRGENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL 537
                                   ********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.89E-57411561IPR003441NAC domain
PROSITE profilePS5100555.066411561IPR003441NAC domain
PfamPF023654.2E-24413537IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    Send to blast
MRGALTISMS LNLNSPLLLT RLDSSFCRSH PSSITSPSAH TSHLSLGNFP NSLLVSIRRK  60
LFNHRHPTTR GTTSNATTIS LNSFRWHDPS GSHPSLPMTP KRPDPLVPKR AQRTTEDVPD  120
SFFSRSQSLD PNCEKSEKGA HCRDETGVRP GAETGMWTAT CTGGGSGGGG GGLEPSHGSE  180
PRGTEEDEGS GTEQFAITPA YTKYTYAHAC FMLASSSSVQ RPDRRHTHAC VGKIHVRADS  240
VACRRAAVTS DHNKTWPWTS SVRTLPPKAG FILVSPFRLF EPHHHRPLSL STRELPRGPR  300
FLRSKHPGSG YLVHEHATTD RSARRVRTTW HMASLVALRL RPGRWRMTAR AALQLRQGRL  360
GHLAACPRYA MSRDLDDWHY GAAGGAAAGS SEASMGGGGE AAGDSHDNDL VMPGFRFHPT  420
EEELIEFYLR RKVEGRRFNV DLIADLDLYC FDPWELPARA VMGGKEWFFY VPRDRKYRNG  480
DRPNRVTASG YWKATGADRM IRGENNRPIG LKKTLVFYSG KAPKGVRSSW IMNEYRLPPP  540
AADAEPLTHK SEISLCRVYK RSGIDDGRGQ PSSSSTQASA GRRTRSGRHM STSSASSPLS  600
PIPSSFHLLQ GECPSASPPA IMDQMMITAD NVSQLVLPPT ARAFAPPGNS LAAVAPAEGA  660
TILASTDSLL NMAAVPMGIS GPVDKLGTVV GDSQAYANHI SAATGSDFLP LPSTQPMSQV  720
APLGALPMTA PLSSVDDKLG WDWNPVPDTT TRDYRTSIFK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A3e-5241356122168NAC domain-containing protein 19
3swm_B3e-5241356122168NAC domain-containing protein 19
3swm_C3e-5241356122168NAC domain-containing protein 19
3swm_D3e-5241356122168NAC domain-containing protein 19
3swp_A3e-5241356122168NAC domain-containing protein 19
3swp_B3e-5241356122168NAC domain-containing protein 19
3swp_C3e-5241356122168NAC domain-containing protein 19
3swp_D3e-5241356122168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01685.1.g00040.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004962060.11e-153NAC domain-containing protein 35
TrEMBLK3Z6L91e-152K3Z6L9_SETIT; Uncharacterized protein
STRINGSi022103m1e-152(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP28263787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.26e-86NAC domain containing protein 35