PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01559.1.g00110.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family TALE
Protein Properties Length: 489aa    MW: 52804.4 Da    PI: 7.7415
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01559.1.g00110.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.64.8e-092312681954
                                   HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                      Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                                   Fe   ++yps  ++  LA+++gL+ +qV++WF N R +
  Zpz_sc01559.1.g00110.1.am.mk 231 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 268
                                   664459******************************88 PP

2BELL71.51.5e-231081621872
                          BELL  18 eVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                                    +d+rY++y+eq++ v++ Feavag  +a  Yt+lA+++iSrhFr+L+d i+ q+
  Zpz_sc01559.1.g00110.1.am.mk 108 LLDRRYRRYCEQMRSVAGGFEAVAGERAASAYTALASRTISRHFRNLRDGIVAQL 162
                                   579*************************************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.3E-631160IPR006563POX domain
PfamPF075261.2E-20105158IPR006563POX domain
PROSITE profilePS5007112.195209272IPR001356Homeobox domain
SMARTSM003896.6E-9212276IPR001356Homeobox domain
CDDcd000862.54E-12212273No hitNo description
SuperFamilySSF466891.63E-17213279IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.5E-28215278IPR009057Homeodomain-like
PfamPF059206.1E-18229268IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
MVAGRVHLRQ GQGRVPFPGP RPSLLETSIP LPFFRYLLSL HEACWPGPLP SRPAFQFPVS  60
AQQRHDTGSA SLLLFFSACC STASPLRMPI PCHSILSASA HTTQFLLLLD RRYRRYCEQM  120
RSVAGGFEAV AGERAASAYT ALASRTISRH FRNLRDGIVA QLQAARKALG EKDVGVRGMT  180
CGETPRLRVL DQCIRQQKAL NLQAGMMESQ PWRPQRGLPE RAVTILRAWL FEHFLHPYPS  240
DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMVEEMYVE EMKGEQQHDD GGGSSGGGHV  300
NPNPSISEAS ELAYNVGRQH GVSETADGGS NNGIDRKPTR EQLLHDAGSL AAVVSVGSGV  360
ACAGPGGGAR LVESFGVMDH LDFDAYDDDG HHQAAGGFGS VSLTLGLQQH SGSRGESGGV  420
NIAFGAPPSS AHHGGYLFAA PGHQHMEGGD HHQYVQLGAA MDGGEAPQGQ EHYRNLSAAG  480
FHLLRDLAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5bng_A3e-17218276159Homeobox protein Meis2
5bng_B3e-17218276159Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01559.1.g00110.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9579621e-176EU957962.1 Zea mays clone 1638491 BEL1-related homeotic protein 14 mRNA, complete cds.
GenBankEU9579801e-176EU957980.1 Zea mays clone 1639087 BEL1-related homeotic protein 14 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985907.11e-159homeobox protein BEL1 homolog
RefseqXP_012698473.11e-159homeobox protein BEL1 homolog
RefseqXP_012698474.11e-159homeobox protein BEL1 homolog
TrEMBLA0A1E5UVC11e-163A0A1E5UVC1_9POAL; Homeobox protein BEL1-like protein
STRINGSi034720m1e-158(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38143764
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.19e-76TALE family protein