PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01463.1.g00070.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 686aa    MW: 74394.5 Da    PI: 10.0382
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01463.1.g00070.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.51.3e-491132401128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGf+F P+deelv++yL+kkv+++++    ++ evd++  ePw+Lp  +k + +ewyfFs rd+kyatg+r+nratk+g
  Zpz_sc01463.1.g00070.1.am.mk 113 LPPGFKFFPSDEELVCHYLHKKVANERIAQ-GTLVEVDLHAREPWELPDVAKLTASEWYFFSFRDRKYATGSRTNRATKTG 192
                                   79*************************998.88***************77777889************************* PP

                           NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatgkd+ev s  ++++vg++ktLvfy+grap+g+k+ Wvmhe+rl
  Zpz_sc01463.1.g00070.1.am.mk 193 YWKATGKDREVRSPaTRAVVGMRKTLVFYHGRAPNGVKSGWVMHEFRL 240
                                   *************977788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-58105259IPR003441NAC domain
PROSITE profilePS5100557.532113259IPR003441NAC domain
PfamPF023651.8E-26114240IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 686 aa     Download sequence    Send to blast
MRVVLFASSI DDDQANSKVP GWFAHQLGSR VAFTAGTGKN ITSVVPHRAS YDNNTVACRG  60
GTLLAAHRHR RQLPRGTGKP ASLGSPDRDS PVDGRTAHHG NRAMALREIE STLPPGFKFF  120
PSDEELVCHY LHKKVANERI AQGTLVEVDL HAREPWELPD VAKLTASEWY FFSFRDRKYA  180
TGSRTNRATK TGYWKATGKD REVRSPATRA VVGMRKTLVF YHGRAPNGVK SGWVMHEFRL  240
DTPCSSPRED WVLCRVFEKT KGDGAADGHD SASGASSSPT LTGSSSHVDA PERQEHHAPC  300
GGYYGAGFAP QQEVAVLLPC YGSYGPPAVD RHGFPQDDAG GALPAGFEFG VREVAGDEYG  360
FGYFDMAGFE YVGNHGHGGM GQRVTAWCGT PSSPPAAYTC ARPLAAGVKP PPPAVLTVPY  420
EEPEPTPAAA CSGCTWGLGN AVARSSSPVT DTKDGGPREA AAALGQAHRR SNAPKQIEQG  480
TQRTHMLLDA ILFVDLTSCS WRRRRTNQRP ADRPARHAGA GKNNSDLHCS PYEHQQASKK  540
IDMRGANICK GRTGRRRGPG RRMRSNSTGR PVLAALDPFH GSVHRHSVMA PCAAIIAALL  600
ARAAHSRSSA SSGICDRART RKRKRHWNQN KEETPNNASK CVRPRLDLAL HAHMEDPPTT  660
AAHNMARDTV AMVMNRRPLS SRSSSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-4611225919168NAC domain-containing protein 19
3swm_B2e-4611225919168NAC domain-containing protein 19
3swm_C2e-4611225919168NAC domain-containing protein 19
3swm_D2e-4611225919168NAC domain-containing protein 19
3swp_A2e-4611225919168NAC domain-containing protein 19
3swp_B2e-4611225919168NAC domain-containing protein 19
3swp_C2e-4611225919168NAC domain-containing protein 19
3swp_D2e-4611225919168NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01463.1.g00070.1.am.mk
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0381221e-161BT038122.1 Zea mays full-length cDNA clone ZM_BFb0212P24 mRNA, complete cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69738166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.11e-71NAC domain containing protein 74