PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zpz_sc01415.1.g00100.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Nin-like | ||||||||
Protein Properties | Length: 578aa MW: 62884.8 Da PI: 6.0363 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 23.7 | 9.4e-08 | 511 | 538 | 1 | 28 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvc 28 aek++sl++l++yF++++kdAA++Lgv Zpz_sc01415.1.g00100.1.am.mk 511 AEKTVSLQVLRQYFAGSLKDAARSLGVP 538 5899**********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 578 aa Download sequence Send to blast |
MGGGEGDPRP NVSVLACTPS EGDLDLLEQL LSGDNAWLEV ASRSPSSLAS PPATAFFAAD 60 ATATTVTATT GNTGCLLQTG GASPSSVRER FNQALAYIRE TQSDGDVLVQ LWVPVKGHEG 120 RLVLTTSGQP FTLDHRSDSL IRFREVSTKY HFSADVTSGT PGLPGRVFIG GLPEWSPDVR 180 YFTSYEYPRV SHAQILDVHG TMGLPVFEKG SSSCLGVIEL IMTKQKLNFT PELNAICSAL 240 QFSSASYKDA LPEILEVLKA ACLIHKLPLA QTWVTCAQQG KRGSRHSDEN YHYCISTIDE 300 ACFVNEPRMQ NFHEACSEHH LLRGEGVAGK AFTTNQPCFQ PDIGSSAKLD YPLSHHAKIF 360 NLKGAVAIRL RCTRTGSADF VLEFFLPTDC EALEEQRAVL DSLSETMRSV CQTLRVVTDK 420 EMEEETVLEM NELNSFTPQG KNRVEELSFG YNSRDHRGET TWTSVAETSH QESGLAALRM 480 HGMFPPDEQG PSLSGAQITA EGRKAKRRTK AEKTVSLQVL RQYFAGSLKD AARSLGVPTS 540 FPAAFSSSPL ASPPSMPNDH PITPLRHPEA SAMPPPPP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Zpz_sc01415.1.g00100.1.am.mk |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025800526.1 | 0.0 | protein NLP1-like isoform X1 | ||||
Swissprot | Q9LE38 | 1e-146 | NLP4_ARATH; Protein NLP4 | ||||
TrEMBL | A0A3L6QR05 | 0.0 | A0A3L6QR05_PANMI; Protein NLP1 isoform X2 | ||||
STRING | Pavir.Bb02544.1.p | 0.0 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5554 | 38 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G20640.2 | 1e-135 | Nin-like family protein |