PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01411.1.g00230.1.am.mk
Organism
Zoysia pacifica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 129aa    MW: 13738.3 Da    PI: 11.293
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01411.1.g00230.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.51.4e-0771101338
                           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgt 38 
                                   y+G+r ++ +g+Wv+eIr+p+    + +r++lg+  +
  Zpz_sc01411.1.g00230.1.am.mk  71 YRGIR-CR-SGKWVSEIREPR----KaRRIWLGTLWY 101
                                   9***9.55.6*********94....36******9766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.49370105IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-570104IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.3E-1071101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MADQQRPQQQ QSPASSPPDT KPQAPGPGPS SPCSTTPVAQ GDATTGVSTA PAAATSSGEP  60
SPRSSGKHAF YRGIRCRSGK WVSEIREPRK ARRIWLGTLW YKRAAGSPQF ASMAALSQAT  120
LLKQWSSSW
Cis-element ? help Back to Top
SourceLink
PlantRegMapZpz_sc01411.1.g00230.1.am.mk
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1693723e-59AC169372.2 Sorghum bicolor clone SB_BBc0156J18, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025826401.19e-30ethylene-responsive transcription factor ERF027-like
TrEMBLA0A2S3GRZ02e-28A0A2S3GRZ0_9POAL; Uncharacterized protein
STRINGOPUNC02G25450.15e-25(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36542762
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-15ERF family protein